RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SUMO2P61956 95 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 SS18Q15532 418 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 FAM71F2Q6NXP2 309 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 C1QL4Q86Z23 238 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ZNF547Q8IVP9 402 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 QTRT1Q9BXR0 403 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 U3KQK5 164 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ZNF98A6NK75 572 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 RPL36AP83881 106 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 DAZAP2Q15038 168 aaPredicted RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 SPHARQ15513 63 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PRR27Q6MZM9 219 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 FDX2Q6P4F2 183 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 C5orf17Q8NAS9 161 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 RPL36ALQ969Q0 106 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 FAM60AQ9NP50 221 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 KIF26BQ2KJY2 2108 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 IGHV2OR16-5A0A0B4J2B6 119 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 IGHV3-64DA0A0J9YX35 117 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 EFNA2O43921 213 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SSSCA1O60232 199 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 COL8A1P27658 744 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SCAND1P57086 179 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 OR8D4Q8NGM9 314 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SPI1P17947 270 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ACTL10Q5JWF8 245 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CHCHD5Q9BSY4 110 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 IGHV1-69DA0A0B4J2H0 117 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 IGHV1-69P01742 117 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 HLA-DQA1P01909 254 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 HSD17B1P14061 328 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CABLES2Q9BTV7 478 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 DIMT1Q9UNQ2 313 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 CHST2Q9Y4C5 530 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 TSPAN2O60636 221 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 BCL3P20749 454 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PAX8Q06710 450 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 EFNB3Q15768 340 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 WDR38Q5JTN6 314 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 RNF182Q8N6D2 247 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 HGDQ93099 445 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PLSCR4Q9NRQ2 329 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SIGLEC8Q9NYZ4 499 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 MELTFP08582 738 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 FAM74A4Q5TZK3 123 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 BRD3OSQ6XYD6 125 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 OR2G3Q8NGZ4 309 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ZNF430Q9H8G1 570 aaPredicted RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 ZNF705EA8MWA4 302 aaPredicted RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 DMRTA1Q5VZB9 504 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 AKAP14Q86UN6 197 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 DMRTB1Q96MA1 342 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 PRELID3AQ96N28 172 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 WFIKKN1Q96NZ8 548 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 FIZ1Q96SL8 496 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 NAA60Q9H7X0 242 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SPART-AS1P0CW21 52 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SERF2P84101 59 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SLC25A34Q6PIV7 304 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 C1orf122Q6ZSJ8 110 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ISCA2Q86U28 154 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CADM3Q8N126 398 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 SAMD10Q9BYL1 202 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 FAM229AH3BQW9 127 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 EPGNQ6UW88 154 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 OR4C5Q8NGB2 326 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 TMEM82A0PJX8 343 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CCL2P13500 99 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ZNF250P15622 560 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CDAP32320 146 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 LYZL4Q96KX0 146 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 GEMIN7Q9H840 131 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 OR51B2Q9Y5P1 312 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 RFPL4AA6NLU0 287 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 RFPL4AL1F8VTS6 287 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 FGF16O43320 207 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 ZFPL1O95159 310 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 HSPB1P04792 205 aaKnown RBP2.82□□□□□ -1.96
LPP-220ENST00000617246 OR2G6Q5TZ20 316 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CLEC19AQ6UXS0 136 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 TMEM183AQ8IXX5 376 aa2.82□□□□□ -1.96
LPP-220ENST00000617246 CEP290O15078 2479 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGLV3-16A0A075B6K0 115 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 TIAF1O95411 115 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 CELA2AP08217 269 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MPV17P39210 176 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ATP5IP56385 69 aaPredicted RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 TEX45Q8NA69 505 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 OR5AN1Q8NGI8 311 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ALG14Q96F25 216 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ABCG5Q9H222 651 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 RFNGQ9Y644 331 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 IGHV2-70DA0A0C4DH43 119 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 RPL35AP18077 110 aaKnown RBP2.81□□□□□ -1.96
LPP-220ENST00000617246 TAS2R60P59551 318 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 OR2F1Q13607 317 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 ADIPOQQ15848 244 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 MSRB3Q8IXL7 192 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 SYS1Q8N2H4 156 aa2.81□□□□□ -1.96
LPP-220ENST00000617246 PPIL3Q9H2H8 161 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms