RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 HLA-DRB1P01911 266 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 WNT2P09544 360 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 CFPP27918 469 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 BSGP35613 385 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.33
NOP56-220ENST00000616692 OOSP2Q86WS3 158 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 OR10D3Q8NH80 312 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 ST6GALNAC6Q969X2 333 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 KCNS1Q96KK3 526 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 H7C1C5 153 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 RPL8P62917 257 aaKnown RBP12.96□□□□□ -0.33
NOP56-220ENST00000616692 DEFB109BQ30KR1 87 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 ACSM2BQ68CK6 577 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 TCF23Q7RTU1 214 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 OR5D14Q8NGL3 314 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 ASCL2Q99929 193 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 C5orf66Q9H5L9 145 aa12.96□□□□□ -0.33
NOP56-220ENST00000616692 A0A0G2JLM5 398 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 PRR19A6NJB7 356 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 CPSF4LA6NMK7 179 aaKnown RBP12.96□□□□□ -0.34
NOP56-220ENST00000616692 PMCHP20382 165 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 HRH1P35367 487 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 ERVK11-1P61568 191 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 SCCPDHQ8NBX0 429 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 PATE1Q8WXA2 126 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 DDB2Q92466 427 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 FAM3DQ96BQ1 224 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 FAM206AQ9NX38 181 aa12.96□□□□□ -0.34
NOP56-220ENST00000616692 TNFRSF6BO95407 300 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 CATR1Q13166 79 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 SGCBQ16585 318 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 ACSF3Q4G176 576 aaPredicted RBP12.95□□□□□ -0.34
NOP56-220ENST00000616692 LCN12Q6JVE5 192 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 LCN10Q6JVE6 187 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 BORCS7Q96B45 105 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 FEZF1A0PJY2 475 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 GGTLC2Q14390 218 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 VAX1Q5SQQ9 334 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 OR4N5Q8IXE1 308 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 C1orf123Q9NWV4 160 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 TMEM160Q9NX00 188 aa12.95□□□□□ -0.34
NOP56-220ENST00000616692 SPTA1P02549 2419 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 A0A1W2PPM0 123 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 ISLRO14498 428 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 HMGB3O15347 200 aaKnown RBP12.94□□□□□ -0.34
NOP56-220ENST00000616692 SLC16A7O60669 478 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 NHLRC4P0CG21 123 aaPredicted RBP12.94□□□□□ -0.34
NOP56-220ENST00000616692 POU2AF1Q16633 256 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 FRG2Q64ET8 278 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 ACSM6Q6P461 480 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 SPATA12Q7Z6I5 190 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 FRG2BQ96QU4 278 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 GGTLC1Q9BX51 225 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 DMRT3Q9NQL9 472 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 SPANXA1Q9NS26 97 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 ATMQ13315 3056 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 AHCTF1Q8WYP5 2266 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 hADV38S2A0JD32 116 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 DHHO43323 396 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 MT-ATP8P03928 68 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 KIR2DL2P43627 348 aaPredicted RBP12.94□□□□□ -0.34
NOP56-220ENST00000616692 OR1D4P47884 311 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 PDCD1Q15116 288 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 WDR34Q96EX3 536 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 CLEC7AQ9BXN2 247 aa12.94□□□□□ -0.34
NOP56-220ENST00000616692 AREGP15514 252 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 CA7P43166 264 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 SPINT3P49223 89 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 CDRT4Q8N9R6 151 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 LRRC75AQ8NAA5 344 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 PECRQ9BY49 303 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 ARHGEF17Q96PE2 2063 aaPredicted RBP12.93□□□□□ -0.34
NOP56-220ENST00000616692 NSG1A0A0A6YYJ2 146 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 CCDC179H3BU77 68 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 ZNF324O75467 553 aaPredicted RBP12.93□□□□□ -0.34
NOP56-220ENST00000616692 NKX2-1P43699 371 aaPredicted RBP12.93□□□□□ -0.34
NOP56-220ENST00000616692 UQCRFS1P47985 274 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 LRRC75BQ2VPJ9 315 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 TRAPPC6BQ86SZ2 158 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.93□□□□□ -0.34
NOP56-220ENST00000616692 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 TMUB1Q9BVT8 246 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 TXNIPQ9H3M7 391 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 HRASLS2Q9NWW9 162 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 LINC00312Q9Y6C7 94 aa12.93□□□□□ -0.34
NOP56-220ENST00000616692 HECTD1Q9ULT8 2610 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 CENPVL3A0A0U1RRI6 287 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 FHL5Q5TD97 284 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 OR2L13Q8N349 312 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 ZNF71Q9NQZ8 489 aaPredicted RBP12.92□□□□□ -0.34
NOP56-220ENST00000616692 CELSR3Q9NYQ7 3312 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 A0A1W2PS18 150 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 SYNGR1O43759 233 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 HLA-DRB5Q30154 266 aa12.92□□□□□ -0.34
NOP56-220ENST00000616692 TMEM78Q5T7P6 136 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms