RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SRP14P37108 136 aaKnown RBP11.08□□□□□ -0.64
MSH6-214ENST00000616033 PCBD1P61457 104 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
MSH6-214ENST00000616033 TRBV20OR9-2A0A075B6H5 130 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 A0A1W2PQM1 296 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 ZNF503-AS2A6NEH8 195 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 ANKRD30BLA7E2S9 258 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 CDIPTO14735 213 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 SOX8P57073 446 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 RAC3P60763 192 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 SUMO1P63165 101 aaKnown RBP11.07□□□□□ -0.64
MSH6-214ENST00000616033 KRTCAP3Q53RY4 240 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 H2BFWTQ7Z2G1 175 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 STARD4Q96DR4 205 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
MSH6-214ENST00000616033 TMEM147Q9BVK8 224 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 PLCE1Q9P212 2302 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 C17orf98A8MV24 154 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 APOBEC3DQ96AK3 386 aaPredicted RBP11.07□□□□□ -0.64
MSH6-214ENST00000616033 UHRF2Q96PU4 802 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 ELOVL5Q9NYP7 299 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 LOC105371242A0A075B767 164 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 GNG7O60262 68 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 CLDN14O95500 239 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 OR4A47Q6IF82 309 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 IL36GQ9NZH8 169 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 EXPH5Q8NEV8 1989 aa11.07□□□□□ -0.64
MSH6-214ENST00000616033 COL4A2P08572 1712 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 LNP1A1A4G5 178 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 SYNGR4O95473 234 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 CCL4P13236 92 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 RAC2P15153 192 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 PDLIM4P50479 330 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 KLF3P57682 345 aaPredicted RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 TCTAP57738 103 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 RPL15P61313 204 aaKnown RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 CEACAM21Q3KPI0 293 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 TUSC5Q8IXB3 177 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 MEGF9Q9H1U4 602 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 GVINP1Q7Z2Y8 2422 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 H0Y8G0 127 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 GABRA2P47869 451 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 AESQ08117 197 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 C17orf82Q86X59 251 aaPredicted RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 DOLPP1Q86YN1 238 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 MRGPRDQ8TDS7 321 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 HEYLQ9NQ87 328 aaPredicted RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 FAM166BA8MTA8 275 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 SAP30O75446 220 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 CFIP05156 583 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 SELENOTP62341 195 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 MRPL49Q13405 166 aaKnown RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 CDX2Q99626 313 aaPredicted RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 PROK2Q9HC23 129 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 TP53TG3Q9ULZ0 132 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
MSH6-214ENST00000616033 TBL2Q9Y4P3 447 aaKnown RBP11.06□□□□□ -0.64
MSH6-214ENST00000616033 EP300Q09472 2414 aaPredicted RBP11.05□□□□□ -0.64
MSH6-214ENST00000616033 TNFSF13O75888 250 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 IGLV2-14P01704 120 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 TDGF1P13385 188 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 EDDM3AQ14507 147 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 HES3Q5TGS1 186 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 ZNF826PQ6ZT77 177 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 NINJ1Q92982 152 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 MRPS17Q9Y2R5 130 aaKnown RBP11.05□□□□□ -0.64
MSH6-214ENST00000616033 ZNF253O75346 499 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 OR2H2O95918 312 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 LHX2P50458 406 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 AGMATQ9BSE5 352 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 IGLV3-32A0A0A0MS00 114 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 IGHV5-10-1A0A0J9YXX1 117 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 ZNF716A6NP11 495 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 CA1P00915 261 aaPredicted RBP11.05□□□□□ -0.64
MSH6-214ENST00000616033 UBE2V1Q13404 147 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 PCOLCEQ15113 449 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 TRIM61Q5EBN2 209 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 SPATA31B1PQ5VZV4 182 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 SPINK14Q6IE38 97 aa11.05□□□□□ -0.64
MSH6-214ENST00000616033 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 CELA3AP09093 270 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 CXCL12P48061 93 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 PPOXP50336 477 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 GFRA1P56159 465 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 RPL31P62899 125 aaKnown RBP11.04□□□□□ -0.64
MSH6-214ENST00000616033 RELBQ01201 579 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 PLP2Q04941 152 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 ABHD12Q8N2K0 398 aa11.04□□□□□ -0.64
MSH6-214ENST00000616033 DCTN5Q9BTE1 182 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms