RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 RTN4RQ9BZR6 473 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 ALPK2Q86TB3 2170 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 COX6CP09669 75 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 C1RLQ9NZP8 487 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 KNTC1P50748 2209 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 TTC32Q5I0X7 151 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 RAB1CQ92928 201 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 FSCN3Q9NQT6 498 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 SERF1AO75920 110 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 CD5P06127 495 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 C2orf83Q53S99 150 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 PRDM13Q9H4Q3 707 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 CLDN16Q9Y5I7 305 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 C7orf71A4D174 169 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 SH2D7A6NKC9 451 aaPredicted RBP16.09■□□□□ 0.17
SPAST-203ENST00000615843 J3QRE1 110 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 CELA2AP08217 269 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 MRPL32Q9BYC8 188 aaKnown RBP16.09■□□□□ 0.17
SPAST-203ENST00000615843 WNT5BQ9H1J7 359 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 WNT16Q9UBV4 365 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
SPAST-203ENST00000615843 TRAV9-1A0A075B6T8 112 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 ATP5G3P48201 142 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 ARL6IP6Q8N6S5 226 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 WDR31Q8NA23 367 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 ZNF784Q8NCA9 323 aaPredicted RBP16.09■□□□□ 0.17
SPAST-203ENST00000615843 OR51G1Q8NGK1 321 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 FOXD3Q9UJU5 478 aaPredicted RBP16.09■□□□□ 0.17
SPAST-203ENST00000615843 ODAMA1E959 279 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 RIPPLY2Q5TAB7 128 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 HIST3H2BBQ8N257 126 aa16.09■□□□□ 0.17
SPAST-203ENST00000615843 SCO2A0A1W2PP80 73 aa16.08■□□□□ 0.17
SPAST-203ENST00000615843 IL6RP08887 468 aaPredicted RBP16.08■□□□□ 0.17
SPAST-203ENST00000615843 TFF3Q07654 80 aa16.08■□□□□ 0.17
SPAST-203ENST00000615843 GAS1P54826 345 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 FAM19A2Q8N3H0 131 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 CCL13Q99616 98 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 TTTY12Q9BZ98 90 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 CACNA1IQ9P0X4 2223 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 CRXO43186 299 aaPredicted RBP16.08■□□□□ 0.16
SPAST-203ENST00000615843 LINC00114Q6XXX2 140 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 TMEM106BQ9NUM4 274 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 C10orf128Q5T292 105 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 TCF24Q7RTU0 167 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 VKORC1L1Q8N0U8 176 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 ZNF714Q96N38 554 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 TMEM208Q9BTX3 173 aa16.08■□□□□ 0.16
SPAST-203ENST00000615843 IGKV3-7A0A075B6H7 116 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 ZNF525Q8N782 197 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 GATAD1Q8WUU5 269 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 NRN1Q9NPD7 142 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 A0A087WV48 116 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 ZDHHC16Q969W1 377 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 CALYQ9NYX4 217 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 IGKV1D-43A0A0B4J1Z2 117 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 LDLRAD4O15165 306 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 ZNF324BQ6AW86 544 aaPredicted RBP16.07■□□□□ 0.16
SPAST-203ENST00000615843 GFI1Q99684 422 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 PLSCR2Q9NRY7 297 aa16.07■□□□□ 0.16
SPAST-203ENST00000615843 TRIP12Q14669 1992 aaPredicted RBP16.07■□□□□ 0.16
SPAST-203ENST00000615843 ZNF324O75467 553 aaPredicted RBP16.06■□□□□ 0.16
SPAST-203ENST00000615843 MC5RP33032 325 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 C1orf53Q5VUE5 145 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 RPS20P60866 119 aaKnown RBP16.06■□□□□ 0.16
SPAST-203ENST00000615843 OR4D5Q8NGN0 318 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 SNAI2O43623 268 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 TMEM78Q5T7P6 136 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 ZNF414Q96IQ9 312 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 JPT1Q9UK76 154 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 H3BTX0 84 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 GFI1BQ5VTD9 330 aa16.06■□□□□ 0.16
SPAST-203ENST00000615843 SLC25A17O43808 307 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 CGAP01215 116 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 ZNF638Q14966 1978 aaKnown RBP16.05■□□□□ 0.16
SPAST-203ENST00000615843 C1orf174Q8IYL3 243 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 TMEM54Q969K7 222 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 C18orf12Q96KH6 178 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 SPOCK3Q9BQ16 436 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 RAB1BQ9H0U4 201 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 MPZP25189 248 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 CCL20P78556 96 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 TCF23Q7RTU1 214 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.05■□□□□ 0.16
SPAST-203ENST00000615843 PPIAL4EA0A075B759 164 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 PPIAL4DF5H284 164 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 PPIAL4FP0DN26 164 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 C1QL4Q86Z23 238 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 PPIAL4AQ9Y536 164 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 PIKFYVEQ9Y2I7 2098 aa16.05■□□□□ 0.16
SPAST-203ENST00000615843 IGKV3-11P04433 115 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 IL4P05112 153 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 ADMP35318 185 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 ZNF146Q15072 292 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 FAM186AA6NE01 2351 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 IGHV3-72A0A0B4J1Y9 119 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 CD3EP07766 207 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 COX5BP10606 129 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 OR4A5Q8NH83 315 aa16.04■□□□□ 0.16
SPAST-203ENST00000615843 TMEM56-RWDD3S4R434 201 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms