RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 OR6C3Q9NZP0 311 aa15.77■□□□□ 0.12
MMP28-204ENST00000615136 TIMM9Q9Y5J7 89 aa15.77■□□□□ 0.12
MMP28-204ENST00000615136 TMPRSS2O15393 492 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 YPEL1O60688 119 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 MMP23AO75900 390 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 FBXL19-AS1Q494R0 122 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 TMEM41BQ5BJD5 291 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 ZNF787Q6DD87 383 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 PINX1Q96BK5 328 aaKnown RBP15.77■□□□□ 0.11
MMP28-204ENST00000615136 MALSU1Q96EH3 234 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 RCC1LQ96I51 464 aaKnown RBP15.77■□□□□ 0.11
MMP28-204ENST00000615136 YPEL4Q96NS1 127 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 YPEL2Q96QA6 119 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 PRORYQ9H606 182 aa15.77■□□□□ 0.11
MMP28-204ENST00000615136 UBE2L5PA0A1B0GUS4 154 aa15.76■□□□□ 0.11
MMP28-204ENST00000615136 IFNA4P05014 189 aa15.76■□□□□ 0.11
MMP28-204ENST00000615136 ARG1P05089 322 aa15.76■□□□□ 0.11
MMP28-204ENST00000615136 RAB5AP20339 215 aa15.76■□□□□ 0.11
MMP28-204ENST00000615136 RAB39BQ96DA2 213 aa15.76■□□□□ 0.11
MMP28-204ENST00000615136 DCHS2Q6V1P9 2916 aa15.76■□□□□ 0.11
MMP28-204ENST00000615136 ANKHD1Q8IWZ3 2542 aaKnown RBP15.75■□□□□ 0.11
MMP28-204ENST00000615136 A0A087WWC5 75 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 KBTBD11-OT1A0A1B0GTJ5 212 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 TMEM178BH3BS89 294 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 CD3EP07766 207 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 BCL2P10415 239 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 GPR12P47775 334 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 SSX7Q7RTT5 188 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 CENPVQ7Z7K6 275 aaPredicted RBP15.75■□□□□ 0.11
MMP28-204ENST00000615136 EDARADDQ8WWZ3 215 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 CISD1Q9NZ45 108 aaKnown RBP15.75■□□□□ 0.11
MMP28-204ENST00000615136 CLN8Q9UBY8 286 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 PMS2P5A8MQ11 134 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 FBP1P09467 338 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 DUTP33316 252 aaKnown RBP15.75■□□□□ 0.11
MMP28-204ENST00000615136 ATP6V1FQ16864 119 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 OR8G2PQ6IF36 304 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 ZNF429Q86V71 674 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 FAM24BQ8N5W8 94 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 FAM234AQ9H0X4 552 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 NCOR1P1Q9H4R4 102 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 DYNLRB1Q9NP97 96 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 GNG13Q9P2W3 67 aa15.75■□□□□ 0.11
MMP28-204ENST00000615136 YLPM1P49750 1951 aaKnown RBP15.75■□□□□ 0.11
MMP28-204ENST00000615136 hCG_1809904A0A1W2PP81 198 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 A0A1W2PR64 198 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 A0A1W2PRV1 198 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 RPL35P42766 123 aaKnown RBP15.74■□□□□ 0.11
MMP28-204ENST00000615136 AKR1D1P51857 326 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 CT45A1Q5HYN5 189 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 LYPD2Q6UXB3 125 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 H2BFWTQ7Z2G1 175 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 SLC35E3Q7Z769 313 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 CT45A3Q8NHU0 189 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 DTD1Q8TEA8 209 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 CIB3Q96Q77 187 aaPredicted RBP15.74■□□□□ 0.11
MMP28-204ENST00000615136 TMEM106BQ9NUM4 274 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 GFOD1Q9NXC2 390 aa15.74■□□□□ 0.11
MMP28-204ENST00000615136 TRGV10A0A0A0MS01 117 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 OR2C1O95371 312 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 NDUFB7P17568 137 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 APOBEC3AP31941 199 aaPredicted RBP15.73■□□□□ 0.11
MMP28-204ENST00000615136 NIPSNAP3BQ9BS92 247 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 TMEM147Q9BVK8 224 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 PPIAL4EA0A075B759 164 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 PPIAL4DF5H284 164 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 M0R1X1 148 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 ZG16O60844 167 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 PPIAL4FP0DN26 164 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 CEBPGP53567 150 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 LCN15Q6UWW0 184 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 TVP23CQ96ET8 276 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 ZNRD1Q9P1U0 126 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 PPIAL4AQ9Y536 164 aa15.73■□□□□ 0.11
MMP28-204ENST00000615136 MARCH11A6NNE9 402 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 VSTM5A8MXK1 200 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 DLK1P80370 383 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 PMS2P11Q13670 270 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 AARDQ4LEZ3 155 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 PRAMEF5Q5TYX0 476 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 FAM90A2PQ658T7 463 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 HRNRQ86YZ3 2850 aaPredicted RBP15.72■□□□□ 0.11
MMP28-204ENST00000615136 TPRP12270 2363 aaKnown RBP15.72■□□□□ 0.11
MMP28-204ENST00000615136 TRAV38-1A0A0B4J264 116 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 MAP1LC3B2A6NCE7 125 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 TNFRSF13BO14836 293 aaPredicted RBP15.72■□□□□ 0.11
MMP28-204ENST00000615136 FCGR3BO75015 233 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 VWC2Q2TAL6 325 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 ZDHHC16Q969W1 377 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 MAP1LC3BQ9GZQ8 125 aa15.72■□□□□ 0.11
MMP28-204ENST00000615136 SLC25A10Q9UBX3 287 aaPredicted RBP15.72■□□□□ 0.11
MMP28-204ENST00000615136 ABCA4P78363 2273 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 C5orf52A6NGY3 159 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 ZNF98A6NK75 572 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 ZFP92A6NM28 416 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 TAGLN2P37802 199 aaKnown RBP15.71■□□□□ 0.11
MMP28-204ENST00000615136 GNG10P50151 68 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 ELLP55199 621 aaPredicted RBP15.71■□□□□ 0.11
MMP28-204ENST00000615136 EFNB3Q15768 340 aa15.71■□□□□ 0.11
MMP28-204ENST00000615136 HEPN1Q6WQI6 88 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms