RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 OR1K1Q8NGR3 316 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 SLC25A40Q8TBP6 338 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 NUDT8Q8WV74 236 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 TANC2Q9HCD6 1990 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 SNRPCP09234 159 aaKnown RBP7.6□□□□□ -1.19
TTC28-208ENST00000612946 FOXF1Q12946 379 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 ATXN8Q156A1 80 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 LRRC29Q8WV35 223 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 NPCDR1Q9BY65 106 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 FOXD3Q9UJU5 478 aaPredicted RBP7.6□□□□□ -1.19
TTC28-208ENST00000612946 THY1P04216 161 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 HS3ST3B1Q9Y662 390 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 TRBV20-1A0A075B6N2 111 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 PSG2P11465 335 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 ZNF137PP52743 207 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 FAM53AQ6NSI3 398 aaPredicted RBP7.6□□□□□ -1.19
TTC28-208ENST00000612946 LYG1Q8N1E2 194 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 SLX1AQ9BQ83 275 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 TMEM187Q14656 261 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 DRAM1Q8N682 238 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 OR4C3Q8NH37 302 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 PROCRQ9UNN8 238 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 WISP3O95389 354 aaPredicted RBP7.59□□□□□ -1.19
TTC28-208ENST00000612946 GPR146Q96CH1 333 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 SF3B6Q9Y3B4 125 aaKnown RBP7.59□□□□□ -1.19
TTC28-208ENST00000612946 KLF12Q9Y4X4 402 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 ATP23Q9Y6H3 246 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 SIP14410 1827 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 PLNP26678 52 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 H7C2G1 150 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 DPM2O94777 84 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 SP9P0CG40 484 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 GCHFRP30047 84 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 CST9LQ9H4G1 147 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 HOXA3O43365 443 aaPredicted RBP7.59□□□□□ -1.19
TTC28-208ENST00000612946 RUNX1Q01196 453 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 OLIG3Q7RTU3 272 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 PRNTQ86SH4 94 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 VKORC1L1Q8N0U8 176 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 PLAC1Q9HBJ0 212 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 MRPS11P82912 194 aaKnown RBP7.59□□□□□ -1.19
TTC28-208ENST00000612946 RTN4RQ9BZR6 473 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 SH3BGRL3Q9H299 93 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 RPL31P62899 125 aaKnown RBP7.59□□□□□ -1.19
TTC28-208ENST00000612946 PIMREGQ9BSJ6 248 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 FBLN5Q9UBX5 448 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 OBSL1O75147 1896 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 ZNF585BQ52M93 769 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 SARAFQ96BY9 339 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 FNDC4Q9H6D8 234 aaPredicted RBP7.59□□□□□ -1.19
TTC28-208ENST00000612946 CCL28Q9NRJ3 127 aa7.59□□□□□ -1.19
TTC28-208ENST00000612946 LOC389332A0A1B0GUA5 103 aa7.59□□□□□ -1.2
TTC28-208ENST00000612946 NDUFB3O43676 98 aa7.59□□□□□ -1.2
TTC28-208ENST00000612946 HDHD3Q9BSH5 251 aaPredicted RBP7.59□□□□□ -1.2
TTC28-208ENST00000612946 CXCL16Q9H2A7 254 aa7.59□□□□□ -1.2
TTC28-208ENST00000612946 A0A0G2JMZ2 1700 aa7.59□□□□□ -1.2
TTC28-208ENST00000612946 LRRC37A2A6NM11 1700 aa7.59□□□□□ -1.2
TTC28-208ENST00000612946 LRRC37AA6NMS7 1700 aa7.59□□□□□ -1.2
TTC28-208ENST00000612946 FAM90A9PA6NNJ1 464 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 RFLNAQ6ZTI6 216 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 NRSN2Q9GZP1 204 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 LIMS2Q7Z4I7 341 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 SELENOHQ8IZQ5 122 aaKnown RBP7.58□□□□□ -1.2
TTC28-208ENST00000612946 LINC01465Q8N7H1 131 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 PEX11BO96011 259 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 LGALS1P09382 135 aaKnown RBP7.58□□□□□ -1.2
TTC28-208ENST00000612946 C2orf83Q53S99 150 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 TMEM78Q5T7P6 136 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 PCOLCE2Q9UKZ9 415 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 GREB1LQ9C091 1923 aaPredicted RBP7.58□□□□□ -1.2
TTC28-208ENST00000612946 ZNF146Q15072 292 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 ZNF841Q6ZN19 808 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 SLC25A10Q9UBX3 287 aaPredicted RBP7.58□□□□□ -1.2
TTC28-208ENST00000612946 HBDP02042 147 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 LGALS7P47929 136 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 ATOH7Q8N100 152 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 THADAQ6YHU6 1953 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 RAMP1O60894 148 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 ASIPP42127 132 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 SOX8P57073 446 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 MMDQ15546 238 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 PPDPFLQ8WWR9 84 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 PGLYRP4Q96LB8 373 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 C1orf61Q13536 156 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 OR51G1Q8NGK1 321 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 ZADH2Q8N4Q0 377 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 LIPT2A6NK58 231 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.58□□□□□ -1.2
TTC28-208ENST00000612946 EFNB2P52799 333 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 KLHDC2Q9Y2U9 406 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 PLXNB3Q9ULL4 1909 aa7.58□□□□□ -1.2
TTC28-208ENST00000612946 PLXND1Q9Y4D7 1925 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 MED13LQ71F56 2210 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.57□□□□□ -1.2
TTC28-208ENST00000612946 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 ZP4Q12836 540 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 Q6ZNB5 142 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 ZNF714Q96N38 554 aa7.57□□□□□ -1.2
TTC28-208ENST00000612946 ARHGAP21Q5T5U3 1957 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms