RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 LHX4Q969G2 390 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 NEU1Q99519 415 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 CTDSP1Q9GZU7 261 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 CLN8Q9UBY8 286 aa12.22□□□□□ -0.45
CDH1-213ENST00000612417 ICE1Q9Y2F5 2266 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 HCFC1P51610 2035 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 POLEQ07864 2286 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 NBEAQ8NFP9 2946 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 CTXND1A0A1B0GTU2 59 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 A0A1B0GV90 55 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 C15orf65H3BRN8 121 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 TGOLN2O43493 480 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 ADH4P08319 380 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 SSTR5P35346 364 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 CDX1P47902 265 aaPredicted RBP12.21□□□□□ -0.45
CDH1-213ENST00000612417 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
CDH1-213ENST00000612417 MZT1Q08AG7 82 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 H2BFWTQ7Z2G1 175 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 OR10P1Q8NGE3 313 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 FAM122AQ96E09 287 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 VKORC1Q9BQB6 163 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 PRORYQ9H606 182 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 DOK5Q9P104 306 aa12.21□□□□□ -0.45
CDH1-213ENST00000612417 NBASA2RRP1 2371 aa12.21□□□□□ -0.46
CDH1-213ENST00000612417 COL6A6A6NMZ7 2263 aa12.21□□□□□ -0.46
CDH1-213ENST00000612417 LINC00473A8K010 186 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 CYB5BO43169 146 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 ZG16O60844 167 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 CD55P08174 381 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 MDKP21741 143 aaPredicted RBP12.2□□□□□ -0.46
CDH1-213ENST00000612417 CD81P60033 236 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HOXA4Q00056 320 aaPredicted RBP12.2□□□□□ -0.46
CDH1-213ENST00000612417 LY6DQ14210 128 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 AARDQ4LEZ3 155 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 NCMAPQ5T1S8 102 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 VHLLQ6RSH7 139 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 BTNL3Q6UXE8 466 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 SSX3Q99909 188 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 MSL2Q9HCI7 577 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 DUSP13Q9UII6 198 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 TRBV24-1A0A075B6N3 115 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 SPINT2O43291 252 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BKO60814 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BJP06899 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 FGF7P21781 194 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BOP23527 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BBP33778 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BDP58876 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BCP62807 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 GNB2P62879 340 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST2H2BEQ16778 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 C3orf36Q3SXR2 165 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.2□□□□□ -0.46
CDH1-213ENST00000612417 CYP2G1PQ6ZSU1 146 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 C22orf34Q6ZV56 151 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BHQ93079 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BNQ99877 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 HIST1H2BMQ99879 126 aa12.2□□□□□ -0.46
CDH1-213ENST00000612417 MARCH11A6NNE9 402 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 LY86O95711 162 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 OPN1MWP04001 364 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 OPN1MW2P0DN77 364 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 OPN1MW3P0DN78 364 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 FAM90A1Q86YD7 464 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 WFDC8Q8IUA0 241 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 CD177Q8N6Q3 437 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 FAM210BQ96KR6 192 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 MANBALQ9NQG1 85 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 NAT8Q9UHE5 227 aa12.19□□□□□ -0.46
CDH1-213ENST00000612417 IFITM10A6NMD0 228 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 TFF1P04155 84 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 CCKARP32238 428 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 ST6GALNAC3Q8NDV1 305 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 JKAMPQ9P055 326 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 SRRM5B3KS81 715 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 KBTBD11O94819 623 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 YIF1AO95070 293 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 TRGC2P03986 189 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 CFHR2P36980 270 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 PSMB3P49720 205 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 LRRC29Q8WV35 223 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 ACTR3CQ9C0K3 210 aaPredicted RBP12.18□□□□□ -0.46
CDH1-213ENST00000612417 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 PLCE1Q9P212 2302 aa12.18□□□□□ -0.46
CDH1-213ENST00000612417 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 CCL21O00585 134 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 CD40P25942 277 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms