RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CD300LFQ8TDQ1 290 aa9.62□□□□□ -0.87
CBWD3-208ENST00000612050 GIMAP1Q8WWP7 306 aa9.62□□□□□ -0.87
CBWD3-208ENST00000612050 DDB2Q92466 427 aa9.62□□□□□ -0.87
CBWD3-208ENST00000612050 OR5B12Q96R08 314 aa9.62□□□□□ -0.87
CBWD3-208ENST00000612050 SPIN2AQ99865 258 aa9.62□□□□□ -0.87
CBWD3-208ENST00000612050 SPIN2BQ9BPZ2 258 aa9.62□□□□□ -0.87
CBWD3-208ENST00000612050 SCPEP1Q9HB40 452 aa9.62□□□□□ -0.87
CBWD3-208ENST00000612050 DPPA5A6NC42 116 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 RAMP3O60896 148 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 IGLV2-23P01705 113 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
CBWD3-208ENST00000612050 ZNF182P17025 639 aaPredicted RBP9.61□□□□□ -0.87
CBWD3-208ENST00000612050 LPCAT3Q6P1A2 487 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 TMEM17Q86X19 198 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 MYOZ3Q8TDC0 251 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 MS4A10Q96PG2 267 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 KLK15Q9H2R5 256 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 AURKAIP1Q9NWT8 199 aaPredicted RBP9.61□□□□□ -0.87
CBWD3-208ENST00000612050 COA4Q9NYJ1 87 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 FBXO7Q9Y3I1 522 aa9.61□□□□□ -0.87
CBWD3-208ENST00000612050 IGKV1D-13A0A0B4J2D9 117 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 SEC14L6B5MCN3 397 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 LINC01619G3V211 115 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 SULT1C2O00338 296 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 OR2A4O95047 310 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 SAA1P0DJI8 122 aaPredicted RBP9.6□□□□□ -0.87
CBWD3-208ENST00000612050 IGKV1-13P0DP09 117 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 PTHLHP12272 177 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 RCVRNP35243 200 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 MAS1LP35410 378 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 INSL3P51460 131 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 ERVK-16P61578 105 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 DGCR2P98153 550 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 PRSS8Q16651 343 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 AADACL3Q5VUY0 350 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 SNX29P2Q8IUI4 249 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 OR5T1Q8NG75 326 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 OR2A7Q96R45 310 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 ZNF2Q9BSG1 426 aaPredicted RBP9.6□□□□□ -0.87
CBWD3-208ENST00000612050 GNB4Q9HAV0 340 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 CCL28Q9NRJ3 127 aa9.6□□□□□ -0.87
CBWD3-208ENST00000612050 I3L521 148 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 RGS5O15539 181 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 TNFSF12O43508 249 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 HPGDSO60760 199 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 DHFRP00374 187 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 PMP2P02689 132 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 PRB2P02812 416 aaPredicted RBP9.59□□□□□ -0.87
CBWD3-208ENST00000612050 HSPB1P04792 205 aaKnown RBP9.59□□□□□ -0.87
CBWD3-208ENST00000612050 IFNA6P05013 189 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
CBWD3-208ENST00000612050 CRYGBP07316 175 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 SMIM18P0DKX4 95 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 DYRK1AQ13627 763 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 C19orf54Q5BKX5 351 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 IDO2Q6ZQW0 420 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 SPAG16Q8N0X2 631 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 OR4A5Q8NH83 315 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 RAB2BQ8WUD1 216 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 SRSF12Q8WXF0 261 aaKnown RBP9.59□□□□□ -0.87
CBWD3-208ENST00000612050 SNAPC3Q92966 411 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 C5orf30Q96GV9 206 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 HRASLSQ9HDD0 168 aa9.59□□□□□ -0.87
CBWD3-208ENST00000612050 MSGN1A6NI15 193 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 SRRM4A7MD48 611 aaKnown RBP9.58□□□□□ -0.88
CBWD3-208ENST00000612050 OVOL1O14753 267 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 CYB5BO43169 146 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.88
CBWD3-208ENST00000612050 KBTBD11O94819 623 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 HPRT1P00492 218 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 OR9G9P0C7N8 305 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 EGR2P11161 476 aaPredicted RBP9.58□□□□□ -0.88
CBWD3-208ENST00000612050 ZP3P21754 424 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 HOXD3P31249 432 aaPredicted RBP9.58□□□□□ -0.88
CBWD3-208ENST00000612050 PJVKQ0ZLH3 352 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 FHL3Q13643 280 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 CTF1Q16619 201 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 TATDN3Q17R31 274 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 DEFB121Q5J5C9 76 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 FAM209BQ5JX69 171 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 CLVS1Q8IUQ0 354 aaPredicted RBP9.58□□□□□ -0.88
CBWD3-208ENST00000612050 DMBX1Q8NFW5 382 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 CASTOR1Q8WTX7 329 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 RHOVQ96L33 236 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 BCL7BQ9BQE9 202 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 ELOVL1Q9BW60 279 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 RANGRFQ9HD47 186 aaPredicted RBP9.58□□□□□ -0.88
CBWD3-208ENST00000612050 EXTL2Q9UBQ6 330 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 VWFP04275 2813 aa9.58□□□□□ -0.88
CBWD3-208ENST00000612050 SOX15O60248 233 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 TPPPO94811 219 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 IGHV3-11P01762 117 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 NQO2P16083 231 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 NAT1P18440 290 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 ELK1P19419 428 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 HLA-DMAP28067 261 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 HRH1P35367 487 aa9.57□□□□□ -0.88
CBWD3-208ENST00000612050 RPL27AP46776 148 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms