RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZC4H2Q9NQZ6 224 aa7.19□□□□□ -1.26
SMAD4-217ENST00000611848 ZNF729A6NN14 1252 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-217ENST00000611848 SCO1O75880 301 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 IGLV2-14P01704 120 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 IGHV1-8P0DP01 117 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 S100GP29377 79 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 SLC35E4Q6ICL7 350 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 RBMS3Q6XE24 437 aaKnown RBP7.18□□□□□ -1.26
SMAD4-217ENST00000611848 BRD3OSQ6XYD6 125 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 BCL6BQ8N143 479 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-217ENST00000611848 BPIFCQ8NFQ6 507 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 AKR1E2Q96JD6 320 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 TOLLIPQ9H0E2 274 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 OR2S2Q9NQN1 319 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 OR1A1Q9P1Q5 309 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 TRAPPC2LQ9UL33 140 aa7.18□□□□□ -1.26
SMAD4-217ENST00000611848 RCL1Q9Y2P8 373 aaKnown RBP7.18□□□□□ -1.26
SMAD4-217ENST00000611848 TMEM30CPA0ZSE6 113 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 SLC25A6P12236 298 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 NKX2-1P43699 371 aaPredicted RBP7.17□□□□□ -1.26
SMAD4-217ENST00000611848 SULT1A2P50226 295 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 HILS1P60008 231 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 ID3Q02535 119 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 KLRD1Q13241 179 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 HCP5Q6MZN7 132 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 HEPN1Q6WQI6 88 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 IL34Q6ZMJ4 242 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 OR13D1Q8NGV5 346 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 SUN5Q8TC36 379 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 ARL11Q969Q4 196 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 BSCL2Q96G97 398 aaPredicted RBP7.17□□□□□ -1.26
SMAD4-217ENST00000611848 PRDM13Q9H4Q3 707 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 WFDC1Q9HC57 220 aa7.17□□□□□ -1.26
SMAD4-217ENST00000611848 TRAV39A0A0B4J263 110 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 KBTBD11-OT1A0A1B0GTJ5 212 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 MEX3AA1L020 520 aaKnown RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 NPFFO15130 113 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 PITX3O75364 302 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 CGB3P0DN86 165 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 CGB7P0DN87 165 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 GZMHP20718 246 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 DLX1P56177 255 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 PRB3Q04118 309 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 GNMTQ14749 295 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 MIDNQ504T8 468 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 RUSC1-AS1Q66K80 236 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 SIGLECL1Q8N7X8 197 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 OR11H6Q8NGC7 330 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 OR13A1Q8NGR1 328 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 IL1F10Q8WWZ1 152 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 ZNF48Q96MX3 618 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 GPHA2Q96T91 129 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 GINS3Q9BRX5 216 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 LINC00574Q9H8X3 128 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 COL6A5A8TX70 2615 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 BORCS7-ASMTA0A0B4J1R7 106 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 A0A1B0GU03 582 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 TMEM218A2RU14 115 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 ZNF705EA8MWA4 302 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 TNFSF12O43508 249 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 SEC11BP0C7V7 166 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 PVALBP20472 110 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 CEACAM6P40199 344 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 LGALS4P56470 323 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 POLR2GP62487 172 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 BLOC1S1P78537 153 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 EWSR1Q01844 656 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 PJVKQ0ZLH3 352 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 MSMO1Q15800 293 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 C17orf58Q2M2W7 97 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 DEFB112Q30KQ8 113 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 CXorf66Q5JRM2 361 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 PXDC1Q5TGL8 231 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 BTNL8Q6UX41 500 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 PNKDQ8N490 385 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 OR2C3Q8N628 320 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 OR10A7Q8NGE5 316 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 LYPD6BQ8NI32 183 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 MRGPRDQ8TDS7 321 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 LSM10Q969L4 123 aaKnown RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 SMIM3Q9BZL3 60 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 TMEM133Q9H2Q1 129 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 RAB9BQ9NP90 201 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 PARP11Q9NR21 331 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 LYRM2Q9NU23 88 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 CALYQ9NYX4 217 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 FAM96BQ9Y3D0 163 aa7.16□□□□□ -1.26
SMAD4-217ENST00000611848 TBL2Q9Y4P3 447 aaKnown RBP7.16□□□□□ -1.26
SMAD4-217ENST00000611848 A0A087X0M5 115 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 A0A1B0GX30 115 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 A0A1W2PRD5 423 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 A0A1W2PRF3 423 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 A0A1W2PRM7 423 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 ODF3BA8MYP8 253 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 C12orf77C9JDV5 145 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 CLDN34H7C241 214 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 TRIM77I1YAP6 450 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 MMP23AO75900 390 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 VENTXO95231 258 aa7.15□□□□□ -1.27
SMAD4-217ENST00000611848 IGKV1-39P01597 117 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms