RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 TMEM268Q5VZI3 342 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 Q6ZS46 218 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 CD300LFQ8TDQ1 290 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 R3HDM4Q96D70 268 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 TMEM56Q96MV1 263 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 RBM14Q96PK6 669 aaKnown RBP9.6□□□□□ -0.87
CLK4-215ENST00000611733 SLC25A33Q9BSK2 321 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 FBXL15Q9H469 300 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 PLEKHA2Q9HB19 425 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 TMEM56-RWDD3S4R434 201 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 NIPBLQ6KC79 2804 aaeCLIP9.6□□□□□ -0.87
CLK4-215ENST00000611733 A0A0A6YYJ9 748 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 IL5P05113 134 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 RAG2P55895 527 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 PJVKQ0ZLH3 352 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 TATDN3Q17R31 274 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 MRGPRG-AS1Q2M3A8 158 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 DHRS7BQ6IAN0 325 aaPredicted RBP9.6□□□□□ -0.87
CLK4-215ENST00000611733 TCTEX1D1Q8N7M0 179 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 Q8N9W7 124 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 OSR1Q8TAX0 266 aaPredicted RBP9.6□□□□□ -0.87
CLK4-215ENST00000611733 ZNF418Q8TF45 676 aaPredicted RBP9.6□□□□□ -0.87
CLK4-215ENST00000611733 SEC22AQ96IW7 307 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 RHOVQ96L33 236 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 CLCC1Q96S66 551 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 VPREB3Q9UKI3 123 aa9.6□□□□□ -0.87
CLK4-215ENST00000611733 CRYGBP07316 175 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 SAA1P0DJI8 122 aaPredicted RBP9.59□□□□□ -0.87
CLK4-215ENST00000611733 HILS1P60008 231 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 BLCAPP62952 87 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 CBX3Q13185 183 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 C2orf68Q2NKX9 166 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 ZNF695Q8IW36 515 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 SLC35G3Q8N808 338 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 UXS1Q8NBZ7 420 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 NPBQ8NG41 125 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 OR5R1Q8NH85 324 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 ZNF431Q8TF32 576 aaPredicted RBP9.59□□□□□ -0.87
CLK4-215ENST00000611733 NSG2Q9Y328 171 aa9.59□□□□□ -0.87
CLK4-215ENST00000611733 MARCH11A6NNE9 402 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 RRHO14718 337 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 NBR2O15453 112 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 ADAP1O75689 374 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 OR2F2O95006 317 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 DUS4LO95620 317 aaKnown RBP9.58□□□□□ -0.88
CLK4-215ENST00000611733 DHFRP00374 187 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 OR9G9P0C7N8 305 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 MYOD1P15172 320 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 NQO2P16083 231 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 LGALS7P47929 136 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 SCGB2A2Q13296 93 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 OR4A47Q6IF82 309 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 Q6ZRM9 215 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 DMBX1Q8NFW5 382 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 MITD1Q8WV92 249 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 FAM212BQ9NTI7 297 aaPredicted RBP9.58□□□□□ -0.88
CLK4-215ENST00000611733 METTL1Q9UBP6 276 aaKnown RBP9.58□□□□□ -0.88
CLK4-215ENST00000611733 ALG5Q9Y673 324 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 POMT1Q9Y6A1 747 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 BTBD17A6NE02 478 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 LINC01548A6NM66 108 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 MPTX1A8MV57 137 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 GPR137BO60478 399 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 NDUFA3O95167 84 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 HOXB5P09067 269 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 ANXA3P12429 323 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 PUSL1Q8N0Z8 303 aaKnown RBP9.58□□□□□ -0.88
CLK4-215ENST00000611733 LGI3Q8N145 548 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 FAM71E2Q8N5Q1 922 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 C5orf56Q8N8D9 126 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 RBPMSQ93062 196 aaKnown RBP9.58□□□□□ -0.88
CLK4-215ENST00000611733 RNF5Q99942 180 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 TMEM140Q9NV12 185 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 SIGLEC9Q9Y336 463 aa9.58□□□□□ -0.88
CLK4-215ENST00000611733 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 DBX1A6NMT0 343 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 B3GALNT1O75752 331 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 HRASP01112 189 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 IL6RP08887 468 aaPredicted RBP9.57□□□□□ -0.88
CLK4-215ENST00000611733 P0C879 139 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 UBE2KP61086 200 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 UBA52P62987 128 aaKnown RBP9.57□□□□□ -0.88
CLK4-215ENST00000611733 C5orf64Q2M2E5 130 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 C11orf88Q6PI97 169 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 C12orf45Q8N5I9 185 aaPredicted RBP9.57□□□□□ -0.88
CLK4-215ENST00000611733 GPR146Q96CH1 333 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 TSNAXQ99598 290 aaKnown RBP9.57□□□□□ -0.88
CLK4-215ENST00000611733 COMMD9Q9P000 198 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 PITPNC1Q9UKF7 332 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 CCSO14618 274 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 SSBP2P81877 361 aaPredicted RBP9.57□□□□□ -0.88
CLK4-215ENST00000611733 POU2AF1Q16633 256 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 TMEM86BQ8N661 226 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 LRTM2Q8N967 370 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 RANBP3Q9H6Z4 567 aaPredicted RBP9.57□□□□□ -0.88
CLK4-215ENST00000611733 MOB4Q9Y3A3 225 aa9.57□□□□□ -0.88
CLK4-215ENST00000611733 C7orf66A4D0T2 115 aa9.56□□□□□ -0.88
CLK4-215ENST00000611733 PRAF2O60831 178 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms