RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 Q8N6K4 173 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 OR2T10Q8NGZ9 312 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 EAF1Q96JC9 268 aaPredicted RBP12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 SSX3Q99909 188 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 CDC42EP3Q9UKI2 254 aa12.8□□□□□ -0.36
CLTCL1-207ENST00000611723 SRRM4A7MD48 611 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 HRASP01112 189 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 IGKV1D-33P01593 117 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 IGKV1-33P01594 117 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 VDAC1P21796 283 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 RPS16P62249 146 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 SCGB2A2Q13296 93 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 Q6YL49 198 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 LSM10Q969L4 123 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 SEC22AQ96IW7 307 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 RITA1Q96K30 269 aa12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 ZNF48Q96MX3 618 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-207ENST00000611723 SHOXO15266 292 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 IGKV1-5P01602 117 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 IGLV2-23P01705 113 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 IL6RP08887 468 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 P0C879 139 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 IER3P46695 156 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 LYZL2Q7Z4W2 148 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 FAM219AQ8IW50 185 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 NPBQ8NG41 125 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 C22orf15Q8WYQ4 148 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 R3HDM4Q96D70 268 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 HARBI1Q96MB7 349 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 TSNAXQ99598 290 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 RAB18Q9NP72 206 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 TMED3Q9Y3Q3 217 aa12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 FBN1P35555 2871 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-207ENST00000611723 MDFIC2A0A1B0GVS7 189 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 SSNA1O43805 119 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 CRYGBP07316 175 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 CD24P25063 80 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 FBLN7Q53RD9 439 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 NMSQ5H8A3 153 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 SLC35G3Q8N808 338 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 OR8H1Q8NGG4 311 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 OR5R1Q8NH85 324 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 RBMXL1Q96E39 390 aaKnown RBP12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 RHOVQ96L33 236 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 PLSCR3Q9NRY6 295 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 MMP24Q9Y5R2 645 aa12.77□□□□□ -0.37
CLTCL1-207ENST00000611723 A0A1B0GVG6 124 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 A6NDX4 124 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 MARCH11A6NNE9 402 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 NDUFA3O95167 84 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 SPDEFO95238 335 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 KRASP01116 189 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 IFNA21P01568 189 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 SLC25A6P12236 298 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 TMEM11P17152 192 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 G6PCP35575 357 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 UBE2KP61086 200 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 ERVK-16P61578 105 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 RRAS2P62070 204 aaPredicted RBP12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 HES1Q14469 280 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 C2orf68Q2NKX9 166 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 GGNBP1Q5YKI7 109 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 TEX45Q8NA69 505 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 UXS1Q8NBZ7 420 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 CHAC2Q8WUX2 184 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 GPR146Q96CH1 333 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 MED28Q9H204 178 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 BET1LQ9NYM9 111 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 TCF19Q9Y242 345 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 STAB1Q9NY15 2570 aa12.76□□□□□ -0.37
CLTCL1-207ENST00000611723 ATRQ13535 2644 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 HMX3A6NHT5 357 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 H3BUX3 64 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 ADAP1O75689 374 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 OR2A4O95047 310 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 HOXB5P09067 269 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 SULT1A3P0DMM9 295 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 SULT1A4P0DMN0 295 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 SRD5A1P18405 259 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 F2RL1P55085 397 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 PSG5Q15238 335 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 VMA21Q3ZAQ7 101 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 H2BFWTQ7Z2G1 175 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 TMEM86BQ8N661 226 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 OR4A5Q8NH83 315 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 SSMEM1Q8WWF3 244 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 RBM14Q96PK6 669 aaKnown RBP12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 OR2A7Q96R45 310 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 C1RLQ9NZP8 487 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 PITPNC1Q9UKF7 332 aa12.75□□□□□ -0.37
CLTCL1-207ENST00000611723 TNCP24821 2201 aa12.74□□□□□ -0.37
CLTCL1-207ENST00000611723 A0A0G2JRQ6 117 aa12.74□□□□□ -0.37
CLTCL1-207ENST00000611723 A0A1B0GU03 582 aa12.74□□□□□ -0.37
CLTCL1-207ENST00000611723 RRHO14718 337 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms