RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 IGHV3-23P01764 117 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 CD3GP09693 182 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 ATF4P18848 351 aaPredicted RBP12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 EWSR1Q01844 656 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 MED22Q15528 200 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 HSD17B12Q53GQ0 312 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 CLEC19AQ6UXS0 136 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 LRRTM1Q86UE6 522 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 EEF1AKMT3Q96AZ1 226 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 ARHGAP5-AS1Q96IT6 56 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 GINS4Q9BRT9 223 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 ZNF430Q9H8G1 570 aaPredicted RBP12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 MLXQ9UH92 298 aa12.95□□□□□ -0.34
CHMP4A-211ENST00000609024 TRAV25A0A0B4J276 109 aa12.94□□□□□ -0.34
CHMP4A-211ENST00000609024 CDK10Q15131 360 aa12.94□□□□□ -0.34
CHMP4A-211ENST00000609024 P2RY14Q15391 338 aa12.94□□□□□ -0.34
CHMP4A-211ENST00000609024 BTNL8Q6UX41 500 aa12.94□□□□□ -0.34
CHMP4A-211ENST00000609024 OR2C3Q8N628 320 aa12.94□□□□□ -0.34
CHMP4A-211ENST00000609024 CYGBQ8WWM9 190 aa12.94□□□□□ -0.34
CHMP4A-211ENST00000609024 PECRQ9BY49 303 aa12.94□□□□□ -0.34
CHMP4A-211ENST00000609024 TMEM213A2RRL7 107 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 IFNA4P05014 189 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 RANBP1P43487 201 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 QRFPP83859 136 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 INSL4Q14641 139 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 MRGPRG-AS1Q2M3A8 158 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 CEACAM19Q7Z692 300 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 OR56B1Q8NGI3 324 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 MARC2Q969Z3 335 aa12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 FYTTD1Q96QD9 318 aaKnown RBP12.93□□□□□ -0.34
CHMP4A-211ENST00000609024 KMT2AQ03164 3969 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 ERICH4A6NGS2 130 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 A8MWP6 167 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 SAA1P0DJI8 122 aaPredicted RBP12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 DEFA4P12838 97 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 IGSF11Q5DX21 431 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 FAM89BQ8N5H3 189 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 CENPOQ9BU64 300 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 MRPS7Q9Y2R9 242 aaKnown RBP12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 PRELID3BQ9Y3B1 194 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 S4R3C0 116 aa12.92□□□□□ -0.34
CHMP4A-211ENST00000609024 HMX3A6NHT5 357 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 ZNF585BQ52M93 769 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 C10orf55Q5SWW7 151 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 AHSA2Q719I0 299 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 PQLC1Q8N2U9 271 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 RNF183Q96D59 192 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 C6orf62Q9GZU0 229 aaPredicted RBP12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 DMRT1Q9Y5R6 373 aa12.91□□□□□ -0.34
CHMP4A-211ENST00000609024 TRBV6-7A0A0A0MS04 114 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 KIR2DL5BA0A0G2JN68 375 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 KIR2DL5BA0A0G2JPC4 375 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 FCGR3BO75015 233 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 HIST1H1BP16401 226 aaKnown RBP12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 TMEM50BP56557 158 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 RAB11BQ15907 218 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 KIR2DL5AQ8N109 375 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 VSTM2AQ8TAG5 236 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 FBLIM1Q8WUP2 373 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 CABLES2Q9BTV7 478 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 MFFQ9GZY8 342 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 OR51E2Q9H255 320 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 MRPL27Q9P0M9 148 aaKnown RBP12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 UFC1Q9Y3C8 167 aa12.9□□□□□ -0.34
CHMP4A-211ENST00000609024 TRBV7-1A0A0A6YYK4 115 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 LINC00473A8K010 186 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 DIRAS3O95661 229 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 MYOD1P15172 320 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 RPL35AP18077 110 aaKnown RBP12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 RPL27AP46776 148 aaKnown RBP12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 LAMTOR1Q6IAA8 161 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 NANOGP1Q8N7R0 232 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 CXorf58Q96LI9 332 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 CCDC140Q96MF4 163 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 S100A14Q9HCY8 104 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 FBXL17Q9UF56 701 aa12.89□□□□□ -0.35
CHMP4A-211ENST00000609024 SLC17A2O00624 439 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 DENRO43583 198 aaKnown RBP12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 CLEC3BP05452 202 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 TALDO1P37837 337 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 PSMD7P51665 324 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 RBMS2Q15434 407 aaKnown RBP12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 OR2B11Q5JQS5 317 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 KCTD9Q7L273 389 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 RAB3CQ96E17 227 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 C5orf30Q96GV9 206 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 OR2A7Q96R45 310 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
CHMP4A-211ENST00000609024 HECTD4Q9Y4D8 3996 aa12.87□□□□□ -0.35
CHMP4A-211ENST00000609024 FOXI3A8MTJ6 420 aaPredicted RBP12.87□□□□□ -0.35
CHMP4A-211ENST00000609024 J3QRK9 145 aa12.87□□□□□ -0.35
CHMP4A-211ENST00000609024 CDK1P06493 297 aa12.87□□□□□ -0.35
CHMP4A-211ENST00000609024 FCGR3AP08637 254 aa12.87□□□□□ -0.35
CHMP4A-211ENST00000609024 CD36P16671 472 aa12.87□□□□□ -0.35
CHMP4A-211ENST00000609024 GALP22466 123 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms