RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	METTL1	Q9UBP6	276 aa	Known RBP	14.21	□□□□□ -0.13
LTBP4-231	ENST00000602251	VSIG4	Q9Y279	399 aa		14.21	□□□□□ -0.13
LTBP4-231	ENST00000602251	PRELID3B	Q9Y3B1	194 aa		14.21	□□□□□ -0.13
LTBP4-231	ENST00000602251		A8MZ25	164 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	SHOX	O15266	292 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	IGF1	P05019	195 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	DUT	P33316	252 aa	Known RBP	14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	LGALS7	P47929	136 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	TAS2R46	P59540	309 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	OR6Q1	Q8NGQ2	317 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	OR5H2	Q8NGV7	314 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	SECTM1	Q8WVN6	248 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	SNAPC3	Q92966	411 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	DLX4	Q92988	240 aa	Predicted RBP	14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	CLCC1	Q96S66	551 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	SPATA25	Q9BR10	227 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	EHF	Q9NZC4	300 aa		14.2	□□□□□ -0.14
LTBP4-231	ENST00000602251	IGHV7-81	A0A0B4J1V7	117 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	RBMY1B	A6NDE4	496 aa	Known RBP	14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	RBMY1E	A6NEQ0	496 aa	Known RBP	14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	CCDC160	A6NGH7	325 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	SPDEF	O95238	335 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	RBMY1D	P0C7P1	496 aa	Known RBP	14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	AADAC	P22760	399 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	PSG5	Q15238	335 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	KCTD9	Q7L273	389 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	C5orf30	Q96GV9	206 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	HARBI1	Q96MB7	349 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	DCUN1D5	Q9BTE7	237 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	SCPEP1	Q9HB40	452 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	EXTL2	Q9UBQ6	330 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	ZNF580	Q9UK33	172 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	ADAM30	Q9UKF2	790 aa		14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	RBMX2	Q9Y388	322 aa	Known RBP	14.19	□□□□□ -0.14
LTBP4-231	ENST00000602251	IGKV1D-13	A0A0B4J2D9	117 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	ATP6V0E1	O15342	81 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	SLC25A17	O43808	307 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	PPY	P01298	95 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	IGKV1-13	P0DP09	117 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	FXYD4	P59646	89 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	HERV-K104	P61576	105 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	ZNF660	Q6AZW8	331 aa	Predicted RBP	14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	ACSM6	Q6P461	480 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	TMEM65	Q6PI78	240 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	C15orf40	Q8WUR7	153 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	HSD17B10	Q99714	261 aa	Known RBP	14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	WSB1	Q9Y6I7	421 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	RYR1	P21817	5038 aa		14.18	□□□□□ -0.14
LTBP4-231	ENST00000602251	TNC	P24821	2201 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	LINC00473	A8K010	186 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	CRYZL1	O95825	349 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	PMP2	P02689	132 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	PPIF	P30405	207 aa	Known RBP	14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	RFX2	P48378	723 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	CX3CL1	P78423	397 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	TMEM177	Q53S58	311 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	GPX8	Q8TED1	209 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	TCTEX1D2	Q8WW35	142 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	GIMAP1	Q8WWP7	306 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	SLC5A7	Q9GZV3	580 aa		14.17	□□□□□ -0.14
LTBP4-231	ENST00000602251	TRAV41	A0A0B4J266	112 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	SULT1C2	O00338	296 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	FCN1	O00602	326 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	FCGR3B	O75015	233 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	CNIH1	O95406	144 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	IGLV1-40	P01703	118 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	IFNA6	P05013	189 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	HLA-DMA	P28067	261 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	SLURP1	P55000	103 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	TMEM267	Q0VDI3	215 aa	Predicted RBP	14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	HAGH	Q16775	308 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	ECSCR	Q19T08	205 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	VMA21	Q3ZAQ7	101 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	TMEM17	Q86X19	198 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	IL17D	Q8TAD2	202 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	OSR1	Q8TAX0	266 aa	Predicted RBP	14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	DDB2	Q92466	427 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	BORCS5	Q969J3	196 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	CCL28	Q9NRJ3	127 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	TAS2R8	Q9NYW2	309 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	CCDC59	Q9P031	241 aa	Known RBP	14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	ANAPC10	Q9UM13	185 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251	A3GALT2	U3KPV4	340 aa		14.16	□□□□□ -0.14
LTBP4-231	ENST00000602251		H3BMQ9	156 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	CA2	P00918	260 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	NAT1	P18440	290 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	RCVRN	P35243	200 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	TSPAN5	P62079	268 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	DYRK1A	Q13627	763 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	RNASE12	Q5GAN4	147 aa	Known RBP	14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	OR2B11	Q5JQS5	317 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	ZNF562	Q6V9R5	426 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	ZNF66	Q6ZN08	573 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	PPP1R27	Q86WC6	154 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	SGPP2	Q8IWX5	399 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	MFSD4A	Q8N468	514 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	ZBTB34	Q8NCN2	500 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	OR6F1	Q8NGZ6	308 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	DYNC2LI1	Q8TCX1	351 aa		14.15	□□□□□ -0.14
LTBP4-231	ENST00000602251	ARPC1A	Q92747	370 aa		14.15	□□□□□ -0.14

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