RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 ACOT13Q9NPJ3 140 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 FKBP14Q9NWM8 211 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 ZNF230Q9UIE0 474 aaPredicted RBP7.25□□□□□ -1.25
VRK3-224ENST00000601849 ADAM30Q9UKF2 790 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 A0A075B6Q4 140 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 TRBV9A0A0B4J1U6 114 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 ZNF320A2RRD8 509 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 C2orf70A6NJV1 201 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 FOXI3A8MTJ6 420 aaPredicted RBP7.24□□□□□ -1.25
VRK3-224ENST00000601849 LGALS9O00182 355 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 BMPR1BO00238 502 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 CYB5BO43169 146 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 FCGR3BO75015 233 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 OR2J3O76001 311 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 NDUFB8O95169 186 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 FCGR3AP08637 254 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 CD7P09564 240 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 HIST1H1BP16401 226 aaKnown RBP7.24□□□□□ -1.25
VRK3-224ENST00000601849 DUTP33316 252 aaKnown RBP7.24□□□□□ -1.25
VRK3-224ENST00000601849 CLDN12P56749 244 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 SSBP2P81877 361 aaPredicted RBP7.24□□□□□ -1.25
VRK3-224ENST00000601849 DEFA5Q01523 94 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 PLAC9Q5JTB6 97 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 ZNF57Q68EA5 555 aaPredicted RBP7.24□□□□□ -1.25
VRK3-224ENST00000601849 IDO2Q6ZQW0 420 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 RBPMS2Q6ZRY4 209 aaKnown RBP7.24□□□□□ -1.25
VRK3-224ENST00000601849 GPHB5Q86YW7 130 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 OR52B4Q8NGK2 314 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 OR10R2Q8NGX6 335 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 CABLES2Q9BTV7 478 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 CCDC90BQ9GZT6 254 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 OR51E2Q9H255 320 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 RETNQ9HD89 108 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 FBXL7Q9UJT9 491 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 ZNF257Q9Y2Q1 563 aa7.24□□□□□ -1.25
VRK3-224ENST00000601849 LOC102724200A0A096LPH7 203 aaPredicted RBP7.23□□□□□ -1.25
VRK3-224ENST00000601849 RBMY1BA6NDE4 496 aaKnown RBP7.23□□□□□ -1.25
VRK3-224ENST00000601849 CXorf65A6NEN9 183 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 RBMY1EA6NEQ0 496 aaKnown RBP7.23□□□□□ -1.25
VRK3-224ENST00000601849 CASQ2O14958 399 aaPredicted RBP7.23□□□□□ -1.25
VRK3-224ENST00000601849 PRH1P02810 166 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 RBMY1DP0C7P1 496 aaKnown RBP7.23□□□□□ -1.25
VRK3-224ENST00000601849 DEFA4P12838 97 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 SNRPBP14678 240 aaKnown RBP7.23□□□□□ -1.25
VRK3-224ENST00000601849 GNB3P16520 340 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 CBLN1P23435 193 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 MAS1LP35410 378 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 ARL3P36405 182 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 LAIR2Q6ISS4 152 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 ZNF645Q8N7E2 425 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 EEF1AKMT3Q96AZ1 226 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 CXorf58Q96LI9 332 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 OR2A7Q96R45 310 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 GGTLC1Q9BX51 225 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 ZNF430Q9H8G1 570 aaPredicted RBP7.23□□□□□ -1.25
VRK3-224ENST00000601849 THYN1Q9P016 225 aa7.23□□□□□ -1.25
VRK3-224ENST00000601849 TMEM272A0A1B0GTI8 110 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 PPP5D1E7EU14 171 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 RGS10O43665 173 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 OR2C1O95371 312 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 LY6G6CO95867 125 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 HRASP01112 189 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 SAA1P0DJI8 122 aaPredicted RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 RAB6AP20340 208 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 MYL9P24844 172 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 RPL27AP46776 148 aaKnown RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 APOC4P55056 127 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 MLLT11Q13015 90 aaPredicted RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 HES5Q5TA89 166 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 OGFRL1Q5TC84 451 aaPredicted RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 TMEM91Q6ZNR0 172 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 Q6ZS49 121 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 KCTD9Q7L273 389 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 SLC38A6Q8IZM9 456 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 TMEM217Q8N7C4 229 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 OR4S2Q8NH73 311 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 DDB2Q92466 427 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 MARC2Q969Z3 335 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 FYTTD1Q96QD9 318 aaKnown RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 HSD17B10Q99714 261 aaKnown RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 ST6GALNAC5Q9BVH7 336 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 ZC4H2Q9NQZ6 224 aa7.22□□□□□ -1.25
VRK3-224ENST00000601849 LSM2Q9Y333 95 aaKnown RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 KLK5Q9Y337 293 aaPredicted RBP7.22□□□□□ -1.25
VRK3-224ENST00000601849 TRBV7-1A0A0A6YYK4 115 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 TRAV25A0A0B4J276 109 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 NUPR2A6NF83 97 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 LINC00473A8K010 186 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 NPIPB5A8MRT5 1133 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 J3QRK9 145 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 HIST1H1DP16402 221 aaKnown RBP7.21□□□□□ -1.26
VRK3-224ENST00000601849 DTYMKP23919 212 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 CRHBPP24387 322 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 RPS25P62851 125 aaKnown RBP7.21□□□□□ -1.26
VRK3-224ENST00000601849 ZNF45Q02386 682 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 CLEC19AQ6UXS0 136 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 H1FOOQ8IZA3 346 aaPredicted RBP7.21□□□□□ -1.26
VRK3-224ENST00000601849 UXS1Q8NBZ7 420 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 TCTEX1D2Q8WW35 142 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 NRG4Q8WWG1 115 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms