RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 LFNGQ8NES3 379 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 OR5H2Q8NGV7 314 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 OR52I2Q8NH67 350 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 CASTOR1Q8WTX7 329 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 TCTEX1D2Q8WW35 142 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 DUX3Q96PT4 197 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 GNB4Q9HAV0 340 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 KLK11Q9UBX7 282 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 FOXA2Q9Y261 457 aaPredicted RBP12.25□□□□□ -0.45
RPS28-203ENST00000600659 A3GALT2U3KPV4 340 aa12.25□□□□□ -0.45
RPS28-203ENST00000600659 RAMP3O60896 148 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 TPPPO94811 219 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 PF4P02776 101 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 RAB9AP51151 201 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 CBX3Q13185 183 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 FHL3Q13643 280 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 RNASE12Q5GAN4 147 aaKnown RBP12.24□□□□□ -0.45
RPS28-203ENST00000600659 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
RPS28-203ENST00000600659 GRPEL2Q8TAA5 225 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 C4orf3Q8WVX3 66 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 NXF2Q9GZY0 626 aaKnown RBP12.24□□□□□ -0.45
RPS28-203ENST00000600659 ZNF430Q9H8G1 570 aaPredicted RBP12.24□□□□□ -0.45
RPS28-203ENST00000600659 SCOCQ9UIL1 159 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 PRELID3BQ9Y3B1 194 aa12.24□□□□□ -0.45
RPS28-203ENST00000600659 NUDT19A8MXV4 375 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 I3L521 148 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 IGLL1P15814 213 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 DGCR2P98153 550 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 VMA21Q3ZAQ7 101 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 UNQ5815/PRO19632Q6UWF5 114 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 VKORC1L1Q8N0U8 176 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 OR4S2Q8NH73 311 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 UBE2E2Q96LR5 201 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 MTFP1Q9UDX5 166 aa12.23□□□□□ -0.45
RPS28-203ENST00000600659 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.45
RPS28-203ENST00000600659 MYCNOSP40205 109 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 HERV-K104P61576 105 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 GNB1P62873 340 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 RUNX1Q01196 453 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 ACTBL2Q562R1 376 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 VAX1Q5SQQ9 334 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 C10orf55Q5SWW7 151 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 AADACL3Q5VUY0 350 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
RPS28-203ENST00000600659 A0A1B0GW64 132 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 M0QYG6 137 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 CCL24O00175 119 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 RGS5O15539 181 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 KBTBD11O94819 623 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 CD33P20138 364 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 POU2AF1Q16633 256 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 LHFPL1Q86WI0 220 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 SPAG16Q8N0X2 631 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 OR6F1Q8NGZ6 308 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 OR51H1Q8NH63 302 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 TMEM167AQ8TBQ9 72 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 SRSF12Q8WXF0 261 aaKnown RBP12.21□□□□□ -0.45
RPS28-203ENST00000600659 SOSTQ9BQB4 213 aa12.21□□□□□ -0.45
RPS28-203ENST00000600659 TINAGL1Q9GZM7 467 aaPredicted RBP12.21□□□□□ -0.45
RPS28-203ENST00000600659 E7EUB6 86 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 RBMXL2O75526 392 aaKnown RBP12.2□□□□□ -0.46
RPS28-203ENST00000600659 PGLYRP1O75594 196 aaPredicted RBP12.2□□□□□ -0.46
RPS28-203ENST00000600659 CD74P04233 296 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 CD3DP04234 171 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 IL6RP08887 468 aaPredicted RBP12.2□□□□□ -0.46
RPS28-203ENST00000600659 KIR2DS2P43631 304 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 TMEM267Q0VDI3 215 aaPredicted RBP12.2□□□□□ -0.46
RPS28-203ENST00000600659 TNXAQ16473 311 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 OR4D10Q8NGI6 311 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 RHOVQ96L33 236 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 DCUN1D5Q9BTE7 237 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 ALX4Q9H161 411 aaPredicted RBP12.2□□□□□ -0.46
RPS28-203ENST00000600659 VSIG4Q9Y279 399 aa12.2□□□□□ -0.46
RPS28-203ENST00000600659 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 CTDSPLO15194 276 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 CNIH1O95406 144 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 BRI3O95415 125 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 RLN1P04808 185 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 CATR1Q13166 79 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 ZNF585BQ52M93 769 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 PYHIN1Q6K0P9 492 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 MMD2Q8IY49 270 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 POC5Q8NA72 575 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 SMIM4Q8WVI0 70 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 OR5B12Q96R08 314 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 RSRP1Q9BUV0 290 aa12.19□□□□□ -0.46
RPS28-203ENST00000600659 C6orf62Q9GZU0 229 aaPredicted RBP12.19□□□□□ -0.46
RPS28-203ENST00000600659 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 CGB1A6NKQ9 187 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 TEX22C9J3V5 150 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 H3BUA1 57 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 GPR31O00270 319 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
RPS28-203ENST00000600659 OR2A4O95047 310 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 S1PR2O95136 353 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
RPS28-203ENST00000600659 ZNF735P0CB33 412 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 APELAP0DMC3 54 aa12.18□□□□□ -0.46
RPS28-203ENST00000600659 MYOD1P15172 320 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms