RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 CABLES2Q9BTV7 478 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 GGTLC1Q9BX51 225 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 ZNF430Q9H8G1 570 aaPredicted RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 C12orf4Q9NQ89 552 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 SMPD3Q9NY59 655 aaPredicted RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 TP53TG1Q9Y2A0 90 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 IGKV1D-8A0A087WSZ0 117 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 CXorf65A6NEN9 183 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 NUPR2A6NF83 97 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 HMX3A6NHT5 357 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 A8MWP6 167 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 SLC17A2O00624 439 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 FABP7O15540 132 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 DIRAS3O95661 229 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 CRYZL1O95825 349 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 CDK1P06493 297 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 CRYGCP07315 174 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 GNAO1P09471 354 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 SAA1P0DJI8 122 aaPredicted RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 RRASP10301 218 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 SERPINB10P48595 397 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 RPL30P62888 115 aaKnown RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 MED21Q13503 144 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 P2RY14Q15391 338 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 TNXAQ16473 311 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 C15orf32Q32M92 178 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 C2orf76Q3KRA6 126 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 VMA21Q3ZAQ7 101 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 TM4SF20Q53R12 229 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 RBM48Q5RL73 367 aaKnown RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 TTC23Q5W5X9 447 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 ZNF57Q68EA5 555 aaPredicted RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 LGALS9CQ6DKI2 356 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 Q6ZWC4 215 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 CEACAM19Q7Z692 300 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 LYG2Q86SG7 212 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 OR6M1Q8NGM8 313 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 OSR1Q8TAX0 266 aaPredicted RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 DYNLRB2Q8TF09 96 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 RNF183Q96D59 192 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 CCDC140Q96MF4 163 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 PHB2Q99623 299 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 SPIN2AQ99865 258 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 SPIN2BQ9BPZ2 258 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 CMSS1Q9BQ75 279 aaKnown RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 URM1Q9BTM9 101 aaKnown RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 OR2D2Q9H210 308 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 FBXL7Q9UJT9 491 aa4.53□□□□□ -1.68
VRK3-220ENST00000600259 LSM2Q9Y333 95 aaKnown RBP4.53□□□□□ -1.68
VRK3-220ENST00000600259 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 TRAV25A0A0B4J276 109 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 CGB1A6NKQ9 187 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 NPIPB5A8MRT5 1133 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 BET1O15155 118 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 SPRY2O43597 315 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 TUSC2O75896 110 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 SCAF4O95104 1147 aaKnown RBP4.52□□□□□ -1.69
VRK3-220ENST00000600259 IGLV2-14P01704 120 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 IGHV3-23P01764 117 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 FCGR3AP08637 254 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 CTRB1P17538 263 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 BMI1P35226 326 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 CLDN12P56749 244 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 EIF4EBP1Q13541 118 aaPredicted RBP4.52□□□□□ -1.69
VRK3-220ENST00000600259 TPBGQ13641 420 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 IRF3Q14653 427 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 CDK10Q15131 360 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 RTL8BQ17RB0 113 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 HSD17B12Q53GQ0 312 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 FAM209BQ5JX69 171 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 CTRB2Q6GPI1 263 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 CLEC19AQ6UXS0 136 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 UNQ9165/PRO28630Q6UXU0 137 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 Q6ZS49 121 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 AHSA2Q719I0 299 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 SLC16A13Q7RTY0 426 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 MMD2Q8IY49 270 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 C10orf67Q8IYJ2 551 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 H1FOOQ8IZA3 346 aaPredicted RBP4.52□□□□□ -1.69
VRK3-220ENST00000600259 PUSL1Q8N0Z8 303 aaKnown RBP4.52□□□□□ -1.69
VRK3-220ENST00000600259 DHRSXQ8N5I4 330 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 OR52B4Q8NGK2 314 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 FAM3DQ96BQ1 224 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 ADTRPQ96IZ2 230 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 SLC2A9Q9NRM0 540 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 ZNF257Q9Y2Q1 563 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 RRP15Q9Y3B9 282 aaKnown RBP4.52□□□□□ -1.69
VRK3-220ENST00000600259 AK6Q9Y3D8 172 aaKnown RBP4.52□□□□□ -1.69
VRK3-220ENST00000600259 S4R3C0 116 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 DNAH2Q9P225 4427 aa4.52□□□□□ -1.69
VRK3-220ENST00000600259 IGLV11-55A0A075B6I3 123 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 KIR2DL5BA0A0G2JN68 375 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 KIR2DL5BA0A0G2JPC4 375 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 TMEM272A0A1B0GTI8 110 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 RAB27BO00194 218 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 MFNGO00587 321 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 UBE2CO00762 179 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 MYL12BO14950 172 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 S1PR2O95136 353 aa4.51□□□□□ -1.69
VRK3-220ENST00000600259 ZNF735P0CB33 412 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms