RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SETD2Q9BYW2 2564 aaPredicted RBP10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 TRAV6A0A075B6T7 132 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 M0QZK8 103 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 RRHO14718 337 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 FGF16O43320 207 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 PEX14O75381 377 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 SFT2D2O95562 160 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 CDS2O95674 445 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 RPA2P15927 270 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 SPNP16150 400 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 RAG2P55895 527 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 UBE2KP61086 200 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 RPL15P61313 204 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 TMEM187Q14656 261 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 C11orf88Q6PI97 169 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 PRIMA1Q86XR5 153 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 CADM3Q8N126 398 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 ZFAND2BQ8WV99 257 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 TMEM56Q96MV1 263 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 MARVELD1Q9BSK0 173 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 KCNIP3Q9Y2W7 256 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 TMEM56-RWDD3S4R434 201 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 ZFHX3Q15911 3703 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 C9orf170A2RU37 121 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 FAM181BA6NEQ2 426 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 TRIM77I1YAP6 450 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 HRASP01112 189 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 SERPINE2P07093 398 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 IL6RP08887 468 aaPredicted RBP10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 OR4E1P0C645 316 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 NQO2P16083 231 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 DHRS2Q13268 280 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 C5orf64Q2M2E5 130 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 MRGPRG-AS1Q2M3A8 158 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 PLET1Q6UQ28 207 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 VKORC1L1Q8N0U8 176 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 PUSL1Q8N0Z8 303 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 TEX45Q8NA69 505 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 LHFPL5Q8TAF8 219 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 R3HDM4Q96D70 268 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 RHOVQ96L33 236 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 FBXL15Q9H469 300 aa10.05□□□□□ -0.8
CHMP2A-206ENST00000600118 NCBP2LA6PVI3 153 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 SLC25A17O43808 307 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 IL5P05113 134 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 P0C879 139 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 SAA1P0DJI8 122 aaPredicted RBP10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 ANXA3P12429 323 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 VAMP1P23763 118 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 BLCAPP62952 87 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 SRSF2Q01130 221 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 OXA1LQ15070 435 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 RGS21Q2M5E4 152 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 ANKRD55Q3KP44 614 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 VMA21Q3ZAQ7 101 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 LYG2Q86SG7 212 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 LRTM2Q8N967 370 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 SEC22AQ96IW7 307 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 AIFM2Q9BRQ8 373 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 NPFFR1Q9GZQ6 430 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 BEX1Q9HBH7 125 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 PRR13Q9NZ81 148 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 KIAA1456Q9P272 454 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 METTL1Q9UBP6 276 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 SIGLEC9Q9Y336 463 aa10.04□□□□□ -0.8
CHMP2A-206ENST00000600118 MARCH11A6NNE9 402 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 INMT-MINDY4F8WBC2 141 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 DUS4LO95620 317 aaKnown RBP10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 KRASP01116 189 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 IGKV1-5P01602 117 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 HLA-AP01891 365 aaKnown RBP10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 HLA-DRB1P01911 266 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 RAB25P57735 213 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 SRPXP78539 464 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 RELBQ01201 579 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 OR4A47Q6IF82 309 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 SELENOHQ8IZQ5 122 aaKnown RBP10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 Q8N2B8 174 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 VSTM2AQ8TAG5 236 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 RBPMSQ93062 196 aaKnown RBP10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 RANBP3Q9H6Z4 567 aaPredicted RBP10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 TMEM140Q9NV12 185 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 BET1LQ9NYM9 111 aa10.03□□□□□ -0.8
CHMP2A-206ENST00000600118 SH2D7A6NKC9 451 aaPredicted RBP10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 FCN1O00602 326 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 TSPAN9O75954 239 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 OR2A4O95047 310 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 G6PCP35575 357 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 ERVK-16P61578 105 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 SSBP2P81877 361 aaPredicted RBP10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 PRSS8Q16651 343 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 C4orf46Q504U0 113 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 TMEM268Q5VZI3 342 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 LIN54Q6MZP7 749 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 Q6ZS46 218 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 Q6ZSV7 163 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 SSX9Q7RTT3 188 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms