RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 FCGR2CP31995 323 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 BRWD1-AS2P59051 145 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 ARPC4P59998 168 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 CDK10Q15131 360 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 OR2B11Q5JQS5 317 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 KCTD9Q7L273 389 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 OVCH2Q7RTZ1 564 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 CROCCP3Q8IVE0 287 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 SRSF12Q8WXF0 261 aaKnown RBP11.58□□□□□ -0.56
LIG1-215ENST00000597901 ACOT12Q8WYK0 555 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 S100A16Q96FQ6 103 aaKnown RBP11.58□□□□□ -0.56
LIG1-215ENST00000597901 OR4C12Q96R67 309 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 HSD17B10Q99714 261 aaKnown RBP11.58□□□□□ -0.56
LIG1-215ENST00000597901 ZNF430Q9H8G1 570 aaPredicted RBP11.58□□□□□ -0.56
LIG1-215ENST00000597901 CCL28Q9NRJ3 127 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 COA4Q9NYJ1 87 aa11.58□□□□□ -0.56
LIG1-215ENST00000597901 MRPS7Q9Y2R9 242 aaKnown RBP11.58□□□□□ -0.56
LIG1-215ENST00000597901 XRCC3O43542 346 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 ACTL6BO94805 426 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 FCER2P06734 321 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 OR9G9P0C7N8 305 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 SAA1P0DJI8 122 aaPredicted RBP11.57□□□□□ -0.56
LIG1-215ENST00000597901 SPNP16150 400 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 LSM3P62310 102 aaKnown RBP11.57□□□□□ -0.56
LIG1-215ENST00000597901 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
LIG1-215ENST00000597901 ZNF66Q6ZN08 573 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 MMD2Q8IY49 270 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 VKORC1L1Q8N0U8 176 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 ADAD2Q8NCV1 583 aaKnown RBP11.57□□□□□ -0.56
LIG1-215ENST00000597901 TCTEX1D2Q8WW35 142 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 USMG5Q96IX5 58 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 WWC2-AS2Q96NR7 200 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 TAS2R8Q9NYW2 309 aa11.57□□□□□ -0.56
LIG1-215ENST00000597901 MPPED1O15442 326 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 RBMXL2O75526 392 aaKnown RBP11.56□□□□□ -0.56
LIG1-215ENST00000597901 TNFAIP8O95379 198 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 ZP3P21754 424 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 CBX5P45973 191 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 DYRK1AQ13627 763 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 OR6Q1Q8NGQ2 317 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 SECTM1Q8WVN6 248 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 GIMAP1Q8WWP7 306 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 GPHA2Q96T91 129 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 VCX3AQ9NNX9 186 aa11.56□□□□□ -0.56
LIG1-215ENST00000597901 PEF1Q9UBV8 284 aaKnown RBP11.56□□□□□ -0.56
LIG1-215ENST00000597901 CREBL2O60519 120 aaPredicted RBP11.55□□□□□ -0.56
LIG1-215ENST00000597901 OR2A4O95047 310 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 DEFA5Q01523 94 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 MSMO1Q15800 293 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 TTC9CQ8N5M4 171 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 ZBTB34Q8NCN2 500 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 OR5AP2Q8NGF4 316 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 SPIN2AQ99865 258 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 ASCL2Q99929 193 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 SPIN2BQ9BPZ2 258 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 SMAD5-AS1Q9Y6J3 95 aa11.55□□□□□ -0.56
LIG1-215ENST00000597901 MEIS3P1A6NDR6 274 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 TNFSF12O43508 249 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 PPYP01298 95 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 PRH1P02810 166 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 GP9P14770 177 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 C10orf55Q5SWW7 151 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 PUSL1Q8N0Z8 303 aaKnown RBP11.54□□□□□ -0.56
LIG1-215ENST00000597901 SAMD12Q8N8I0 201 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 OR13F1Q8NGS4 319 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 VSTM2AQ8TAG5 236 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 SNAPC3Q92966 411 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 SLC5A7Q9GZV3 580 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 AKIP1Q9NQ31 210 aa11.54□□□□□ -0.56
LIG1-215ENST00000597901 TRBV9A0A0B4J1U6 114 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 HMX3A6NHT5 357 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 TRIM64CA6NLI5 447 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 E7EUB6 86 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 HRASP01112 189 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 TRBV12-3P01733 135 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
LIG1-215ENST00000597901 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 SYNJ2BPP57105 145 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 RHOGP84095 191 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 ZNF45Q02386 682 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 ATP5G2Q06055 141 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 TATDN3Q17R31 274 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 UBE2NLQ5JXB2 153 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 DHRS11Q6UWP2 260 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 IL34Q6ZMJ4 242 aa11.53□□□□□ -0.56
LIG1-215ENST00000597901 KBTBD11O94819 623 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 IGLV1-51P01701 117 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 MAS1LP35410 378 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 RFX2P48378 723 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 FXYD4P59646 89 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 TMEM69Q5SWH9 247 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 HAPLN4Q86UW8 402 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 SLC25A42Q86VD7 318 aa11.52□□□□□ -0.57
LIG1-215ENST00000597901 ANKRD13BQ86YJ7 626 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms