RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 LCNL1Q6ZST4 164 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 CMTM1Q8IZ96 169 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 SPAG16Q8N0X2 631 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 KLHL30-AS1Q8NEE0 82 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 MOB3AQ96BX8 217 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 PHB2Q99623 299 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 MTFP1Q9UDX5 166 aa12.1□□□□□ -0.47
XRCC1-206ENST00000597811 IGLV2-23P01705 113 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 CD3DP04234 171 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 ELANEP08246 267 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 UBE2KP61086 200 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 RPL23AP62750 156 aaKnown RBP12.09□□□□□ -0.47
XRCC1-206ENST00000597811 NDPQ00604 133 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 FOXE3Q13461 319 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 MSMO1Q15800 293 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 LPCAT3Q6P1A2 487 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 SSX9Q7RTT3 188 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 VKORC1L1Q8N0U8 176 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 TEX45Q8NA69 505 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 ZFP57Q9NU63 452 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
XRCC1-206ENST00000597811 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
XRCC1-206ENST00000597811 MPPED1O15442 326 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 CREBL2O60519 120 aaPredicted RBP12.08□□□□□ -0.48
XRCC1-206ENST00000597811 HRASP01112 189 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 IGHG4P01861 327 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 RLN1P04808 185 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 SAA1P0DJI8 122 aaPredicted RBP12.08□□□□□ -0.48
XRCC1-206ENST00000597811 PGAM2P15259 253 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 CD33P20138 364 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 GNRHRP30968 328 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 TNFSF8P32971 234 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 TAS2R19P59542 299 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 SCGB2B2Q4G0G5 96 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 PHLDA2Q53GA4 152 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 LFNGQ8NES3 379 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 WFDC9Q8NEX5 89 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 TINAGL1Q9GZM7 467 aaPredicted RBP12.08□□□□□ -0.48
XRCC1-206ENST00000597811 FXYD6Q9H0Q3 95 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
XRCC1-206ENST00000597811 ZNF355PQ9NSJ1 428 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 FOXA2Q9Y261 457 aaPredicted RBP12.08□□□□□ -0.48
XRCC1-206ENST00000597811 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
XRCC1-206ENST00000597811 ZNF701M0R085 212 aaPredicted RBP12.07□□□□□ -0.48
XRCC1-206ENST00000597811 GPR31O00270 319 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 RAB3DO95716 219 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 IGLL1P15814 213 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 EIF4EBP1Q13541 118 aaPredicted RBP12.07□□□□□ -0.48
XRCC1-206ENST00000597811 VAX1Q5SQQ9 334 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 STEAP1BQ6NZ63 245 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 ZNF695Q8IW36 515 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 TCTEX1D1Q8N7M0 179 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 TMEM229BQ8NBD8 167 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 VSTM2AQ8TAG5 236 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 HRASLSQ9HDD0 168 aa12.07□□□□□ -0.48
XRCC1-206ENST00000597811 ARPC1BO15143 372 aaKnown RBP12.06□□□□□ -0.48
XRCC1-206ENST00000597811 RAMP3O60896 148 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 PGLYRP1O75594 196 aaPredicted RBP12.06□□□□□ -0.48
XRCC1-206ENST00000597811 OR2A4O95047 310 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 CRYGBP07316 175 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 APELAP0DMC3 54 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 TBPP20226 339 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 CFHR3Q02985 330 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
XRCC1-206ENST00000597811 PRSS8Q16651 343 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 PYDC2Q56P42 97 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 C18orf65Q6ZTR6 163 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 SLC38A6Q8IZM9 456 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 DMBX1Q8NFW5 382 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 CASTOR1Q8WTX7 329 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 SMIM4Q8WVI0 70 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 OR2A7Q96R45 310 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 NXF2Q9GZY0 626 aaKnown RBP12.06□□□□□ -0.48
XRCC1-206ENST00000597811 NDUFA13Q9P0J0 144 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 NUBP2Q9Y5Y2 271 aa12.06□□□□□ -0.48
XRCC1-206ENST00000597811 CTDSPLO15194 276 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 HPRT1P00492 218 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
XRCC1-206ENST00000597811 PSMB8P28062 276 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
XRCC1-206ENST00000597811 PPP5CP53041 499 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 RAB25P57735 213 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 AKIRIN2Q53H80 203 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 FOXB2Q5VYV0 432 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 ETV3LQ6ZN32 361 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 REC114Q7Z4M0 266 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 MMD2Q8IY49 270 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 ARRDC1Q8N5I2 433 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 DGCR14Q96DF8 476 aaKnown RBP12.05□□□□□ -0.48
XRCC1-206ENST00000597811 RHOVQ96L33 236 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 OR5B12Q96R08 314 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 ZNF430Q9H8G1 570 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms