RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
SSBP4-204ENST00000597724 ABHD1Q96SE0 405 aa13.04□□□□□ -0.32
SSBP4-204ENST00000597724 P2RX4Q99571 388 aa13.04□□□□□ -0.32
SSBP4-204ENST00000597724 ZNF2Q9BSG1 426 aaPredicted RBP13.04□□□□□ -0.32
SSBP4-204ENST00000597724 CCDC59Q9P031 241 aaKnown RBP13.04□□□□□ -0.32
SSBP4-204ENST00000597724 TNCP24821 2201 aa13.04□□□□□ -0.32
SSBP4-204ENST00000597724 NOL3O60936 208 aaKnown RBP13.03□□□□□ -0.32
SSBP4-204ENST00000597724 CNIH1O95406 144 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 GNRHRP30968 328 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 RCVRNP35243 200 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 GNB1P62873 340 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 BEAN1Q3B7T3 259 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 ACTBL2Q562R1 376 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 KPRPQ5T749 579 aaPredicted RBP13.03□□□□□ -0.32
SSBP4-204ENST00000597724 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 LAX1Q8IWV1 398 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 OR6F1Q8NGZ6 308 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 OR4S2Q8NH73 311 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 GRPEL2Q8TAA5 225 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 C15orf40Q8WUR7 153 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 RAX2Q96IS3 184 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 CEPT1Q9Y6K0 416 aa13.03□□□□□ -0.32
SSBP4-204ENST00000597724 CCL24O00175 119 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 SAA1P0DJI8 122 aaPredicted RBP13.02□□□□□ -0.33
SSBP4-204ENST00000597724 IGLL1P15814 213 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 KIR2DS2P43631 304 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 PRSS8Q16651 343 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 PYHIN1Q6K0P9 492 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 OR5M8Q8NGP6 311 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 OR52I2Q8NH67 350 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 BORCS5Q969J3 196 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 KLK11Q9UBX7 282 aa13.02□□□□□ -0.33
SSBP4-204ENST00000597724 I3L521 148 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 RBFOX2O43251 390 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■■■■□ 22.9
SSBP4-204ENST00000597724 CATR1Q13166 79 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 RNASE12Q5GAN4 147 aaKnown RBP13.01□□□□□ -0.33
SSBP4-204ENST00000597724 VKORC1L1Q8N0U8 176 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 SPAG16Q8N0X2 631 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 CASTOR1Q8WTX7 329 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 RCC1LQ96I51 464 aaKnown RBP13.01□□□□□ -0.33
SSBP4-204ENST00000597724 TMEM68Q96MH6 324 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 DUX3Q96PT4 197 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 SLIRPQ9GZT3 109 aaKnown RBP13.01□□□□□ -0.33
SSBP4-204ENST00000597724 FXYD6Q9H0Q3 95 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 ZNF430Q9H8G1 570 aaPredicted RBP13.01□□□□□ -0.33
SSBP4-204ENST00000597724 GNB4Q9HAV0 340 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 MTFP1Q9UDX5 166 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 VSIG4Q9Y279 399 aa13.01□□□□□ -0.33
SSBP4-204ENST00000597724 RAMP3O60896 148 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 HRASP01112 189 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 TSPAN5P62079 268 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 RUNX1Q01196 453 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 TNXAQ16473 311 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 VAX1Q5SQQ9 334 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 ASPHD1Q5U4P2 390 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 MMD2Q8IY49 270 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 PUSL1Q8N0Z8 303 aaKnown RBP13□□□□□ -0.33
SSBP4-204ENST00000597724 FCAMRQ8WWV6 532 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 RHOVQ96L33 236 aa13□□□□□ -0.33
SSBP4-204ENST00000597724 MSGN1A6NI15 193 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 M0QYG6 137 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 CREBL2O60519 120 aaPredicted RBP12.99□□□□□ -0.33
SSBP4-204ENST00000597724 DUS4LO95620 317 aaKnown RBP12.99□□□□□ -0.33
SSBP4-204ENST00000597724 CD40LGP29965 261 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 OR5T1Q8NG75 326 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 OR51H1Q8NH63 302 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 VSTM2AQ8TAG5 236 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 SRSF12Q8WXF0 261 aaKnown RBP12.99□□□□□ -0.33
SSBP4-204ENST00000597724 MS4A10Q96PG2 267 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 SLA2Q9H6Q3 261 aa12.99□□□□□ -0.33
SSBP4-204ENST00000597724 GABARAPH6UMI1 98 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 PGLYRP1O75594 196 aaPredicted RBP12.98□□□□□ -0.33
SSBP4-204ENST00000597724 ACTL6BO94805 426 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 OR2A4O95047 310 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 HPRT1P00492 218 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 CD3DP04234 171 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 MRPS10P82664 201 aaKnown RBP12.98□□□□□ -0.33
SSBP4-204ENST00000597724 FHL3Q13643 280 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 AADACL3Q5VUY0 350 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 POC5Q8NA72 575 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 TMEM167AQ8TBQ9 72 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 CD300LFQ8TDQ1 290 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 DIRAS2Q96HU8 199 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 OR5B12Q96R08 314 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 OR2A7Q96R45 310 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 AIFM2Q9BRQ8 373 aa12.98□□□□□ -0.33
SSBP4-204ENST00000597724 C6orf62Q9GZU0 229 aaPredicted RBP12.98□□□□□ -0.33
SSBP4-204ENST00000597724 NXF2Q9GZY0 626 aaKnown RBP12.98□□□□□ -0.33
SSBP4-204ENST00000597724 H3BUA1 57 aa12.97□□□□□ -0.33
SSBP4-204ENST00000597724 GPR31O00270 319 aa12.97□□□□□ -0.33
SSBP4-204ENST00000597724 WIPF1O43516 503 aa12.97□□□□□ -0.33
SSBP4-204ENST00000597724 KBTBD11O94819 623 aa12.97□□□□□ -0.33
SSBP4-204ENST00000597724 RLN1P04808 185 aa12.97□□□□□ -0.33
SSBP4-204ENST00000597724 TBPP20226 339 aa12.97□□□□□ -0.33
SSBP4-204ENST00000597724 UCP3P55916 312 aa12.97□□□□□ -0.33
SSBP4-204ENST00000597724 DGCR2P98153 550 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms