RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 LSM3P62310 102 aaKnown RBP11.7□□□□□ -0.54
LIG1-214ENST00000597146 TAGLNQ01995 201 aaKnown RBP11.7□□□□□ -0.54
LIG1-214ENST00000597146 RTL8BQ17RB0 113 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 OR5AN1Q8NGI8 311 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 DCUN1D5Q9BTE7 237 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 KRTAP4-5Q9BYR2 181 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 DCSTAMPQ9H295 470 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 ADAM30Q9UKF2 790 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
LIG1-214ENST00000597146 TMEM235A6NFC5 223 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 TPPPO94811 219 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 SCAND1P57086 179 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 PDPNQ86YL7 162 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 Q8N402 240 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 S100A16Q96FQ6 103 aaKnown RBP11.69□□□□□ -0.54
LIG1-214ENST00000597146 RHOVQ96L33 236 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 NEURL2Q9BR09 285 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 SRD5A3Q9H8P0 318 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
LIG1-214ENST00000597146 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
LIG1-214ENST00000597146 ARPC1BO15143 372 aaKnown RBP11.68□□□□□ -0.54
LIG1-214ENST00000597146 SHOXO15266 292 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 DIRAS3O95661 229 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 CD7P09564 240 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 RRASP10301 218 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 LGALS7P47929 136 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 CRIP2P52943 208 aaPredicted RBP11.68□□□□□ -0.54
LIG1-214ENST00000597146 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 ARPC4P59998 168 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 CX3CL1P78423 397 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 PSG5Q15238 335 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 PPP1R27Q86WC6 154 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 ZNF383Q8NA42 475 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 NUDCD2Q8WVJ2 157 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 ADTRPQ96IZ2 230 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 CABLES2Q9BTV7 478 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 ZNF355PQ9NSJ1 428 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 GAB2Q9UQC2 676 aa11.68□□□□□ -0.54
LIG1-214ENST00000597146 ANKRD34BA5PLL1 514 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 FCN1O00602 326 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 TMEM127O75204 238 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 TUSC2O75896 110 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 NDUFA3O95167 84 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 CSN3P07498 182 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 EGR2P11161 476 aaPredicted RBP11.67□□□□□ -0.54
LIG1-214ENST00000597146 ZP3P21754 424 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 LINC00205P59089 165 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 KLF5Q13887 457 aaPredicted RBP11.67□□□□□ -0.54
LIG1-214ENST00000597146 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 CNIH2Q6PI25 160 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 UNQ5815/PRO19632Q6UWF5 114 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 Q6ZS49 121 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 H1FOOQ8IZA3 346 aaPredicted RBP11.67□□□□□ -0.54
LIG1-214ENST00000597146 BVESQ8NE79 360 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 OVOL2Q9BRP0 275 aa11.67□□□□□ -0.54
LIG1-214ENST00000597146 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
LIG1-214ENST00000597146 A0A0A6YYH2 397 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 A6NJ64 397 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 SLC22A5O76082 557 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 NFYAP23511 347 aaPredicted RBP11.66□□□□□ -0.54
LIG1-214ENST00000597146 PRR20EP86478 221 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 PRR20CP86479 221 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 PRR20DP86480 221 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 PRR20BP86481 221 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 PRR20AP86496 221 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 PYHIN1Q6K0P9 492 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 ZNF562Q6V9R5 426 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 TCTEX1D1Q8N7M0 179 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 RANGRFQ9HD47 186 aaPredicted RBP11.66□□□□□ -0.54
LIG1-214ENST00000597146 SPATA2Q9UM82 520 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 KLK5Q9Y337 293 aaPredicted RBP11.66□□□□□ -0.54
LIG1-214ENST00000597146 PRELID3BQ9Y3B1 194 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 OR2W1Q9Y3N9 320 aa11.66□□□□□ -0.54
LIG1-214ENST00000597146 IGKV1D-8A0A087WSZ0 117 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 SMIM31A0A1B0GVY4 71 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 PROP1O75360 226 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 SPDEFO95238 335 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 CA2P00918 260 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 TRGV3P03979 118 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 IGKV1-16P04430 117 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 RPS19P39019 145 aaKnown RBP11.65□□□□□ -0.54
LIG1-214ENST00000597146 FXYD3Q14802 87 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 VMA21Q3ZAQ7 101 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 ACTBL2Q562R1 376 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 GRPEL2Q8TAA5 225 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 YIPF6Q96EC8 236 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 HARBI1Q96MB7 349 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 ANXA10Q9UJ72 324 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 NUBP2Q9Y5Y2 271 aa11.65□□□□□ -0.54
LIG1-214ENST00000597146 PKD1P98161 4303 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 ACTL6BO94805 426 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 FCER2P06734 321 aa11.64□□□□□ -0.55
LIG1-214ENST00000597146 CBX5P45973 191 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms