RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 OR10G4Q8NGN3 311 aa18.73■□□□□ 0.59
SRRM1-222ENST00000596378 OR4A16Q8NH70 328 aa18.73■□□□□ 0.59
SRRM1-222ENST00000596378 S1PR3Q99500 378 aa18.73■□□□□ 0.59
SRRM1-222ENST00000596378 OR10G9Q8NGN4 311 aa18.73■□□□□ 0.59
SRRM1-222ENST00000596378 OR10G7Q8NGN6 311 aa18.73■□□□□ 0.59
SRRM1-222ENST00000596378 SAA2-SAA4A0A096LPE2 208 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 SAA2P0DJI9 122 aaPredicted RBP18.72■□□□□ 0.59
SRRM1-222ENST00000596378 CCL8P80075 99 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 SLC35E3Q7Z769 313 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 MRGPRGQ86SM5 289 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 GATAD1Q8WUU5 269 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 SDSLQ96GA7 329 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 GFOD1Q9NXC2 390 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 VAX2Q9UIW0 290 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 KBTBD11-OT1A0A1B0GTJ5 212 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 TDGF1P3P51864 188 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 VWC2Q2TAL6 325 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 HEPN1Q6WQI6 88 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 TMEM140Q9NV12 185 aa18.72■□□□□ 0.59
SRRM1-222ENST00000596378 MMP23AO75900 390 aa18.71■□□□□ 0.59
SRRM1-222ENST00000596378 S100A6P06703 90 aa18.71■□□□□ 0.59
SRRM1-222ENST00000596378 GNG10P50151 68 aa18.71■□□□□ 0.59
SRRM1-222ENST00000596378 GNB2P62879 340 aa18.71■□□□□ 0.59
SRRM1-222ENST00000596378 Q8WTZ3 238 aa18.71■□□□□ 0.59
SRRM1-222ENST00000596378 DDB2Q92466 427 aa18.71■□□□□ 0.59
SRRM1-222ENST00000596378 CEP295Q9C0D2 2601 aa18.71■□□□□ 0.59
SRRM1-222ENST00000596378 PRRG2O14669 202 aa18.71■□□□□ 0.58
SRRM1-222ENST00000596378 CXCL1P09341 107 aa18.71■□□□□ 0.58
SRRM1-222ENST00000596378 ERVFRD-1P60508 538 aa18.71■□□□□ 0.58
SRRM1-222ENST00000596378 ERVK-16P61578 105 aa18.71■□□□□ 0.58
SRRM1-222ENST00000596378 RELBQ01201 579 aa18.71■□□□□ 0.58
SRRM1-222ENST00000596378 Q8NA96 180 aa18.71■□□□□ 0.58
SRRM1-222ENST00000596378 A0A087WWC5 75 aa18.7■□□□□ 0.58
SRRM1-222ENST00000596378 TRGV10A0A0A0MS01 117 aa18.7■□□□□ 0.58
SRRM1-222ENST00000596378 C5orf52A6NGY3 159 aa18.7■□□□□ 0.58
SRRM1-222ENST00000596378 IFNA10P01566 189 aa18.7■□□□□ 0.58
SRRM1-222ENST00000596378 ELOBQ15370 118 aa18.7■□□□□ 0.58
SRRM1-222ENST00000596378 LYG1Q8N1E2 194 aa18.7■□□□□ 0.58
SRRM1-222ENST00000596378 ZNRD1Q9P1U0 126 aa18.7■□□□□ 0.58
SRRM1-222ENST00000596378 ZNF98A6NK75 572 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 RRHO14718 337 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 NQO2P16083 231 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 MAS1LP35410 378 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 CD81P60033 236 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 IQCF2Q8IXL9 164 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 CTXND1A0A1B0GTU2 59 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 DPRXA6NFQ7 191 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 RBFOX2O43251 390 aaKnown RBP eCLIP18.69■□□□□ 0.58
SRRM1-222ENST00000596378 IFNA1P01562 189 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 MDKP21741 143 aaPredicted RBP18.69■□□□□ 0.58
SRRM1-222ENST00000596378 TNFSF4P23510 183 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 RPS10P46783 165 aaKnown RBP18.69■□□□□ 0.58
SRRM1-222ENST00000596378 SPCS3P61009 180 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 AARDQ4LEZ3 155 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 GCSAMLQ5JQS6 135 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 TMEM108Q6UXF1 575 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 Q8N7P7 452 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 ZNF709Q8N972 641 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 MALSU1Q96EH3 234 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 C12orf57Q99622 126 aa18.69■□□□□ 0.58
SRRM1-222ENST00000596378 HEYLQ9NQ87 328 aaPredicted RBP18.69■□□□□ 0.58
SRRM1-222ENST00000596378 TGIF2-C20orf24A0A0A6YYL0 155 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 SMCO3A2RU48 225 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 C16orf97H3BN30 126 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 PRR30Q53SZ7 412 aaPredicted RBP18.68■□□□□ 0.58
SRRM1-222ENST00000596378 ABHD12Q8N2K0 398 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 ZNF251Q9BRH9 671 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 IFNA4P05014 189 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 ZNF788Q6ZQV5 615 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 NUP37Q8NFH4 326 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 RAB24Q969Q5 203 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 P2RX4Q99571 388 aa18.68■□□□□ 0.58
SRRM1-222ENST00000596378 CD1BP29016 333 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 VDAC2P45880 294 aaPredicted RBP18.67■□□□□ 0.58
SRRM1-222ENST00000596378 RAB7AP51149 207 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 BSPH1Q075Z2 132 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 ZNF383Q8NA42 475 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 TMEM170AQ8WVE7 144 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 FAM90A9PA6NNJ1 464 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 THBDP07204 575 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 OR4A8P0C604 315 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 MRPS11P82912 194 aaKnown RBP18.67■□□□□ 0.58
SRRM1-222ENST00000596378 MEF2BQ02080 365 aaPredicted RBP18.67■□□□□ 0.58
SRRM1-222ENST00000596378 ADIPOQQ15848 244 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 ZNF674Q2M3X9 581 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 GFRALQ6UXV0 394 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 OR4S2Q8NH73 311 aa18.67■□□□□ 0.58
SRRM1-222ENST00000596378 TMPRSS2O15393 492 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 MBP02144 154 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 IRF2P14316 349 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 MYOD1P15172 320 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 FABP9Q0Z7S8 132 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 RBMS3Q6XE24 437 aaKnown RBP18.66■□□□□ 0.58
SRRM1-222ENST00000596378 ASCL5Q7RTU5 278 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 ZNF439Q8NDP4 499 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 ACTR3CQ9C0K3 210 aaPredicted RBP18.66■□□□□ 0.58
SRRM1-222ENST00000596378 SDF2L1Q9HCN8 221 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 WDR83OSQ9Y284 106 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 GFRA3O60609 400 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 FOXC1Q12948 553 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms