RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ZNF45Q02386 682 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 ATP5G2Q06055 141 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 ARFRP1Q13795 201 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 EXOSC2Q13868 293 aaKnown RBP18.13■□□□□ 0.49
LSM4-202ENST00000593564 TBCEQ15813 527 aaPredicted RBP18.13■□□□□ 0.49
LSM4-202ENST00000593564 SSX1Q16384 188 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 ZNF367Q7RTV3 350 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 SPIN2AQ99865 258 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 SPIN2BQ9BPZ2 258 aa18.13■□□□□ 0.49
LSM4-202ENST00000593564 IGKV1D-8A0A087WSZ0 117 aa18.12■□□□□ 0.49
LSM4-202ENST00000593564 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.12■□□□□ 0.49
LSM4-202ENST00000593564 ACTL6BO94805 426 aa18.12■□□□□ 0.49
LSM4-202ENST00000593564 PRH1P02810 166 aa18.12■□□□□ 0.49
LSM4-202ENST00000593564 DTYMKP23919 212 aa18.12■□□□□ 0.49
LSM4-202ENST00000593564 MYL9P24844 172 aa18.12■□□□□ 0.49
LSM4-202ENST00000593564 CDK10Q15131 360 aa18.12■□□□□ 0.49
LSM4-202ENST00000593564 PLECQ15149 4684 aaKnown RBP18.12■□□□□ 0.49
LSM4-202ENST00000593564 LAX1Q8IWV1 398 aa18.12■□□□□ 0.49
LSM4-202ENST00000593564 ANKRD65E5RJM6 399 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 TUSC2O75896 110 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 ARL6IP1Q15041 203 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 ADAMTSL5Q6ZMM2 481 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 LINC00322Q6ZN03 302 aaPredicted RBP18.11■□□□□ 0.49
LSM4-202ENST00000593564 MMD2Q8IY49 270 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 TTC9CQ8N5M4 171 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 ZNF645Q8N7E2 425 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 NECAP1Q8NC96 275 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 NDUFB11Q9NX14 153 aa18.11■□□□□ 0.49
LSM4-202ENST00000593564 FCGR3BO75015 233 aa18.1■□□□□ 0.49
LSM4-202ENST00000593564 RAB3BP20337 219 aa18.1■□□□□ 0.49
LSM4-202ENST00000593564 CD81P60033 236 aa18.1■□□□□ 0.49
LSM4-202ENST00000593564 CD300EQ496F6 205 aaPredicted RBP18.1■□□□□ 0.49
LSM4-202ENST00000593564 FAM209BQ5JX69 171 aa18.1■□□□□ 0.49
LSM4-202ENST00000593564 C10orf55Q5SWW7 151 aa18.1■□□□□ 0.49
LSM4-202ENST00000593564 ELF5Q9UKW6 265 aaPredicted RBP18.1■□□□□ 0.49
LSM4-202ENST00000593564 CEPT1Q9Y6K0 416 aa18.1■□□□□ 0.49
LSM4-202ENST00000593564 SLC25A42Q86VD7 318 aa18.09■□□□□ 0.49
LSM4-202ENST00000593564 KCTD12Q96CX2 325 aaKnown RBP18.09■□□□□ 0.49
LSM4-202ENST00000593564 DCUN1D5Q9BTE7 237 aa18.09■□□□□ 0.49
LSM4-202ENST00000593564 HIPK2Q9H2X6 1198 aa18.09■□□□□ 0.49
LSM4-202ENST00000593564 PLEKHA3Q9HB20 300 aa18.09■□□□□ 0.49
LSM4-202ENST00000593564 PRELID3BQ9Y3B1 194 aa18.09■□□□□ 0.49
LSM4-202ENST00000593564 TRDV1A0A1B0GX56 115 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 TPPPO94811 219 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 CTXN2P0C2S0 81 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 C15orf32Q32M92 178 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 KCTD9Q7L273 389 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 NR2C2APQ86WQ0 139 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 NEURL2Q9BR09 285 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 ATG5Q9H1Y0 275 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 RETNQ9HD89 108 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 SLC2A8Q9NY64 477 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 MRPS7Q9Y2R9 242 aaKnown RBP18.08■□□□□ 0.48
LSM4-202ENST00000593564 RBMX2Q9Y388 322 aaKnown RBP18.08■□□□□ 0.48
LSM4-202ENST00000593564 OR2W1Q9Y3N9 320 aa18.08■□□□□ 0.48
LSM4-202ENST00000593564 J3QRK9 145 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 SLC22A5O76082 557 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 HLA-DQB1P01920 261 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 CD36P16671 472 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 GALP22466 123 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 CDNFQ49AH0 187 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 DYNLRB2Q8TF09 96 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 ZNF257Q9Y2Q1 563 aa18.07■□□□□ 0.48
LSM4-202ENST00000593564 ZNF785A8K8V0 405 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 OR2J3O76001 311 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 IGLV2-14P01704 120 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 NFYAP23511 347 aaPredicted RBP18.06■□□□□ 0.48
LSM4-202ENST00000593564 RPL30P62888 115 aaKnown RBP18.06■□□□□ 0.48
LSM4-202ENST00000593564 DEFB114Q30KQ6 69 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 HACD4Q5VWC8 232 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 ST6GALNAC5Q9BVH7 336 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 OR51E2Q9H255 320 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 DCSTAMPQ9H295 470 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 BLOC1S6Q9UL45 172 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 DMRT1Q9Y5R6 373 aa18.06■□□□□ 0.48
LSM4-202ENST00000593564 TEX22C9J3V5 150 aa18.05■□□□□ 0.48
LSM4-202ENST00000593564 CD7P09564 240 aa18.05■□□□□ 0.48
LSM4-202ENST00000593564 OR2B11Q5JQS5 317 aa18.05■□□□□ 0.48
LSM4-202ENST00000593564 VSTM2AQ8TAG5 236 aa18.05■□□□□ 0.48
LSM4-202ENST00000593564 ZC4H2Q9NQZ6 224 aa18.05■□□□□ 0.48
LSM4-202ENST00000593564 IGKV1D-13A0A0B4J2D9 117 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 HMX3A6NHT5 357 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 C2orf70A6NJV1 201 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 NPIPB5A8MRT5 1133 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 PPP5D1E7EU14 171 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 LGALS9O00182 355 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 GGCTO75223 188 aaKnown RBP18.04■□□□□ 0.48
LSM4-202ENST00000593564 IGKV1-13P0DP09 117 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 FOLR2P14207 255 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 KIR2DS2P43631 304 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 C22orf42Q6IC83 251 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 CNIH2Q6PI25 160 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 VKORC1L1Q8N0U8 176 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 DEFB125Q8N687 156 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 OR4S2Q8NH73 311 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 IL17DQ8TAD2 202 aa18.04■□□□□ 0.48
LSM4-202ENST00000593564 HSD17B10Q99714 261 aaKnown RBP18.04■□□□□ 0.48
LSM4-202ENST00000593564 TECRQ9NZ01 308 aaKnown RBP18.04■□□□□ 0.48
LSM4-202ENST00000593564 RBMY1BA6NDE4 496 aaKnown RBP18.03■□□□□ 0.48
LSM4-202ENST00000593564 RBMY1EA6NEQ0 496 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms