RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 OOSP2Q86WS3 158 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 CHST4Q8NCG5 386 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 OR4D11Q8NGI4 311 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 OR51A2Q8NGJ7 313 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 OR4S2Q8NH73 311 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 OR10D3Q8NH80 312 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 JOSD2Q8TAC2 188 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 NEIL3Q8TAT5 605 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 BLNKQ8WV28 456 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 PHYHIPLQ96FC7 376 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 FOPNLQ96NB1 174 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 HSPB9Q9BQS6 159 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 EMC6Q9BV81 110 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 RSPO3Q9BXY4 272 aaPredicted RBP3.5□□□□□ -1.85
SMAD4-216ENST00000593223 TMEM126AQ9H061 195 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 DMAC2Q9NW81 257 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 CALYQ9NYX4 217 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 SPRR3Q9UBC9 169 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 VAX2Q9UIW0 290 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 NEU3Q9UQ49 428 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 WSB1Q9Y6I7 421 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 DOCK6Q96HP0 2047 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 FOCADQ5VW36 1801 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 PTPRJQ12913 1337 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TGP01266 2768 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 RYR3Q15413 4870 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TRAV39A0A0B4J263 110 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 A0A1W2PRE2 83 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 CCDC160A6NGH7 325 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 MFSD11O43934 449 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 YIF1AO95070 293 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TNFSF15O95150 251 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 CCNE2O96020 404 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 APOA2P02652 100 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF19P17023 458 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 IL2RGP31785 369 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 MYCNOSP40205 109 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 RPL29P47914 159 aaKnown RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 MARCKSL1P49006 195 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 KLF3P57682 345 aaPredicted RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TIMM10P62072 90 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 EBPQ15125 230 aaKnown RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TTC32Q5I0X7 151 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TMEM255AQ5JRV8 349 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF684Q5T5D7 378 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 FAM162BQ5T6X4 162 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 HENMT1Q5T8I9 393 aaKnown RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 ZFAND6Q6FIF0 208 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 NANOGP8Q6NSW7 305 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 Q8N7P7 452 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 SRSF12Q8WXF0 261 aaKnown RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 SLC25A38Q96DW6 304 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 FMC1Q96HJ9 113 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 CAPZA3Q96KX2 299 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 FAM19A4Q96LR4 140 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 OR4K3Q96R72 315 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 HIST1H4GQ99525 98 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 KLF6Q99612 283 aaPredicted RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 RTBDNQ9BSG5 229 aaPredicted RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TMEM70Q9BUB7 260 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 EFCAB11Q9BUY7 163 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 TM2D1Q9BX74 207 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 SRXN1Q9BYN0 137 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 ULBP3Q9BZM4 244 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 CHST5Q9GZS9 411 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 OR51E2Q9H255 320 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 SH3BGRL3Q9H299 93 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 NANOGQ9H9S0 305 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 LYRM2Q9NU23 88 aaPredicted RBP3.49□□□□□ -1.85
SMAD4-216ENST00000593223 SS18L2Q9UHA2 77 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 GLS2Q9UI32 602 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 PSG8Q9UQ74 426 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF780BQ9Y6R6 833 aa3.49□□□□□ -1.85
SMAD4-216ENST00000593223 MYH1P12882 1939 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 CSPG4Q6UVK1 2322 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 COL4A2P08572 1712 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 IGKV1D-8A0A087WSZ0 117 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 TRAV8-2A0A0B4J237 113 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 IGHV3OR16-9A0A0B4J2B5 98 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 OR5H1A6NKK0 313 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 BTNL10A8MVZ5 291 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 EEF1E1-BLOC1S5C9J1V9 151 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 J3QT63 122 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 K7ENP7 123 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 HMGB3O15347 200 aaKnown RBP3.48□□□□□ -1.85
SMAD4-216ENST00000593223 EEF1E1O43324 174 aaKnown RBP3.48□□□□□ -1.85
SMAD4-216ENST00000593223 SUPT7LO94864 414 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 DBIP07108 87 aaKnown RBP3.48□□□□□ -1.85
SMAD4-216ENST00000593223 PFN1P07737 140 aaKnown RBP3.48□□□□□ -1.85
SMAD4-216ENST00000593223 METTL15P1P0C7V9 234 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 GABRA1P14867 456 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 NELFEP18615 380 aaKnown RBP3.48□□□□□ -1.85
SMAD4-216ENST00000593223 PHBP35232 272 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 CD200P41217 278 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 LGALS7P47929 136 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF133P52736 654 aaPredicted RBP3.48□□□□□ -1.85
SMAD4-216ENST00000593223 WNT4P56705 351 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms