RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 CHTOPQ9Y3Y2 248 aaKnown RBP12.02□□□□□ -0.49
CIRBP-242ENST00000593093 IGHV5-10-1A0A0J9YXX1 117 aa12.02□□□□□ -0.49
CIRBP-242ENST00000593093 ARL14EPLP0DKL9 152 aa12.02□□□□□ -0.49
CIRBP-242ENST00000593093 DAZAP2Q15038 168 aaPredicted RBP12.02□□□□□ -0.49
CIRBP-242ENST00000593093 MIEN1Q9BRT3 115 aa12.02□□□□□ -0.49
CIRBP-242ENST00000593093 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
CIRBP-242ENST00000593093 LRP5LA4QPB2 252 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 HNRNPA3P51991 378 aaKnown RBP12.01□□□□□ -0.49
CIRBP-242ENST00000593093 AESQ08117 197 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 SPINK14Q6IE38 97 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 ZNF586Q9NXT0 402 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 C17orf98A8MV24 154 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 SH2D1BO14796 132 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 UMODP07911 640 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 CXCL12P48061 93 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 C17orf82Q86X59 251 aaPredicted RBP12.01□□□□□ -0.49
CIRBP-242ENST00000593093 OCC1Q8TAD7 63 aa12.01□□□□□ -0.49
CIRBP-242ENST00000593093 ZNF253O75346 499 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 SOX8P57073 446 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 RPL30P62888 115 aaKnown RBP12□□□□□ -0.49
CIRBP-242ENST00000593093 SPATA45Q537H7 98 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
CIRBP-242ENST00000593093 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 IL19Q9UHD0 177 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 PSG11Q9UQ72 335 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 OR2H2O95918 312 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 GNG3P63215 75 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 PCOLCEQ15113 449 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 TRIM61Q5EBN2 209 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 KMT5CQ86Y97 462 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 CHRNA10Q9GZZ6 450 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 IGLV3-32A0A0A0MS00 114 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 H0Y8G0 127 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 ETV2O00321 342 aaPredicted RBP12□□□□□ -0.49
CIRBP-242ENST00000593093 HLA-DRB5Q30154 266 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 ZNF826PQ6ZT77 177 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 GCNT2Q8N0V5 402 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 APH1AQ96BI3 265 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 POLEQ07864 2286 aa12□□□□□ -0.49
CIRBP-242ENST00000593093 MED12LQ86YW9 2145 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 PTPRZ1P23471 2315 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-242ENST00000593093 SELENOTP62341 195 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 WDR74Q6RFH5 385 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-242ENST00000593093 CORO2AQ92828 525 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 UHRF2Q96PU4 802 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 FZR1Q9UM11 496 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 COA6Q5JTJ3 125 aaKnown RBP11.99□□□□□ -0.49
CIRBP-242ENST00000593093 PRAMEF5Q5TYX0 476 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 PRAMEF6Q5VXH4 476 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 NHLRC2Q8NBF2 726 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 REPIN1Q9BWE0 567 aaKnown RBP11.99□□□□□ -0.49
CIRBP-242ENST00000593093 OBP2BQ9NPH6 170 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 ZNF391Q9UJN7 358 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-242ENST00000593093 PXMP4Q9Y6I8 212 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 ZNF716A6NP11 495 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 FCGR3BO75015 233 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 DUSP3P51452 185 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-242ENST00000593093 CATR1Q13166 79 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 DOLPP1Q86YN1 238 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 ABHD12Q8N2K0 398 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 LSM10Q969L4 123 aaKnown RBP11.99□□□□□ -0.49
CIRBP-242ENST00000593093 ELOVL5Q9NYP7 299 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 CACNA1HO95180 2353 aa11.99□□□□□ -0.49
CIRBP-242ENST00000593093 IGLV3-12A0A075B6K2 115 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 HES3Q5TGS1 186 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 SIT1Q9Y3P8 196 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 RIF1Q5UIP0 2472 aaKnown RBP11.98□□□□□ -0.49
CIRBP-242ENST00000593093 ZNF503-AS2A6NEH8 195 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 CELA3AP09093 270 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 CD1BP29016 333 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 KRTCAP3Q53RY4 240 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 LCN12Q6JVE5 192 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 DNASE2BQ8WZ79 361 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 GALMQ96C23 342 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 TBL2Q9Y4P3 447 aaKnown RBP11.98□□□□□ -0.49
CIRBP-242ENST00000593093 LRRC30A6NM36 301 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 WNT9BO14905 357 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 RAB29O14966 203 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 RPL31P62899 125 aaKnown RBP11.98□□□□□ -0.49
CIRBP-242ENST00000593093 MRPL49Q13405 166 aaKnown RBP11.98□□□□□ -0.49
CIRBP-242ENST00000593093 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 DCTN5Q9BTE1 182 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 PROK2Q9HC23 129 aa11.98□□□□□ -0.49
CIRBP-242ENST00000593093 BDP1A6H8Y1 2624 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 RNF212BA8MTL3 300 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 PLGLB1Q02325 96 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 LINC00696Q6ZRV3 163 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 OR4P4Q8NGL7 312 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 BCL2L2Q92843 193 aaPredicted RBP11.97□□□□□ -0.49
CIRBP-242ENST00000593093 ST6GALNAC6Q969X2 333 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 SF3B5Q9BWJ5 86 aaKnown RBP11.97□□□□□ -0.49
CIRBP-242ENST00000593093 QTRT1Q9BXR0 403 aaKnown RBP11.97□□□□□ -0.49
CIRBP-242ENST00000593093 CLCF1Q9UBD9 225 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 TNFSF13O75888 250 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 OR4A16Q8NH70 328 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 C1QTNF5Q9BXJ0 243 aa11.97□□□□□ -0.49
CIRBP-242ENST00000593093 HES7Q9BYE0 225 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms