RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRBV6-7A0A0A0MS04 114 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 A8MZ25 164 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 H7C2Y5 167 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 NOL3O60936 208 aaKnown RBP7.99□□□□□ -1.13
VPS4B-207ENST00000591519 IGKV1-16P04430 117 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 FRMD6-AS1P0C7T7 363 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 NFYAP23511 347 aaPredicted RBP7.99□□□□□ -1.13
VPS4B-207ENST00000591519 CD40LGP29965 261 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 RPL5P46777 297 aaKnown RBP7.99□□□□□ -1.13
VPS4B-207ENST00000591519 LINC00205P59089 165 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 TAS2R20P59543 309 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 PITPNAQ00169 270 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 PLGLAQ15195 96 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 RNASE12Q5GAN4 147 aaKnown RBP7.99□□□□□ -1.13
VPS4B-207ENST00000591519 PDPNQ86YL7 162 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 ZNF383Q8NA42 475 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 LFNGQ8NES3 379 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 MUC7Q8TAX7 377 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 CASTOR1Q8WTX7 329 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 ARPC1AQ92747 370 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 RCHY1Q96PM5 261 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 TSNAXQ99598 290 aaKnown RBP7.99□□□□□ -1.13
VPS4B-207ENST00000591519 CABLES2Q9BTV7 478 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 OR2D2Q9H210 308 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 IFT46Q9NQC8 304 aa7.99□□□□□ -1.13
VPS4B-207ENST00000591519 METTL1Q9UBP6 276 aaKnown RBP7.99□□□□□ -1.13
VPS4B-207ENST00000591519 CCDC160A6NGH7 325 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 H3BUA1 57 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 M0R1X1 148 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 XRCC3O43542 346 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 CRYGBP07316 175 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 ELK1P19419 428 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 LGALS7P47929 136 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 ARPC4P59998 168 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 RPS16P62249 146 aaKnown RBP7.98□□□□□ -1.13
VPS4B-207ENST00000591519 CASC10Q5T4H9 136 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 MZT2AQ6P582 158 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 SNX29P2Q8IUI4 249 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 Q8N1Y9 231 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.98□□□□□ -1.13
VPS4B-207ENST00000591519 BEST4Q8NFU0 473 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 MS4A10Q96PG2 267 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 OR4C12Q96R67 309 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 FAM103A1Q9BTL3 118 aaKnown RBP7.98□□□□□ -1.13
VPS4B-207ENST00000591519 A3GALT2U3KPV4 340 aa7.98□□□□□ -1.13
VPS4B-207ENST00000591519 A0A0A6YYH2 397 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 A0A0G2JLM5 398 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 SMIM31A0A1B0GVY4 71 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 A6NJ64 397 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 RGS5O15539 181 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 TMEM127O75204 238 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 DIRAS3O95661 229 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 CA2P00918 260 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 IGHV3-11P01762 117 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 ZNF182P17025 639 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-207ENST00000591519 ZP3P21754 424 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 TPPP2P59282 170 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 SSBP2P81877 361 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-207ENST00000591519 KLF5Q13887 457 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-207ENST00000591519 FXYD3Q14802 87 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 CNIH2Q6PI25 160 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 OVCH2Q7RTZ1 564 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 WFDC3Q8IUB2 231 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 H1FOOQ8IZA3 346 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-207ENST00000591519 ABHD5Q8WTS1 349 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 RAB2BQ8WUD1 216 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 ACOT12Q8WYK0 555 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 AP3S1Q92572 193 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 C5orf30Q96GV9 206 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 CLCC1Q96S66 551 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 TM2D3Q9BRN9 247 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 ELOVL1Q9BW60 279 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 RANGRFQ9HD47 186 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-207ENST00000591519 C19orf73Q9NVV2 129 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 ANXA10Q9UJ72 324 aa7.97□□□□□ -1.13
VPS4B-207ENST00000591519 IGKV1D-13A0A0B4J2D9 117 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 IGLV2-23P01705 113 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 APOA1P02647 267 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 APOA2P02652 100 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 TRGV3P03979 118 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 IGKV1-13P0DP09 117 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 PRSS3P35030 304 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 TMBIM6P55061 237 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 TAGLNQ01995 201 aaKnown RBP7.96□□□□□ -1.14
VPS4B-207ENST00000591519 SRSF7Q16629 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS4B-207ENST00000591519 Q6ZS49 121 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 HOGA1Q86XE5 327 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 POC5Q8NA72 575 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 SNAPC3Q92966 411 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 ISOC1Q96CN7 298 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 CITED4Q96RK1 184 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 ZMAT4Q9H898 229 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 SDHAF2Q9NX18 166 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 EXTL2Q9UBQ6 330 aa7.96□□□□□ -1.14
VPS4B-207ENST00000591519 HUWE1Q7Z6Z7 4374 aaKnown RBP7.96□□□□□ -1.14
VPS4B-207ENST00000591519 H3BMQ9 156 aa7.95□□□□□ -1.14
VPS4B-207ENST00000591519 CTDSP2O14595 271 aa7.95□□□□□ -1.14
VPS4B-207ENST00000591519 SLC25A17O43808 307 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms