RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TCF19Q9Y242 345 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 ALPK3Q96L96 1907 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 RAMP3O60896 148 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 FOSL1P15407 271 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 LYZP61626 148 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 COX19Q49B96 90 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 Q6ZT83 130 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 OR1L8Q8NGR8 309 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 GTF3AQ92664 365 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 CD55P08174 381 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 SNRPCP09234 159 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 APELAP0DMC3 54 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 CCL8P80075 99 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 OR8I2Q8N0Y5 310 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 M0R2Z0 102 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 NEURL1O76050 574 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 Q0VFX4 171 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 SFRP2Q96HF1 295 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 DCTN5Q9BTE1 182 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 SLC25A10Q9UBX3 287 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 APCSP02743 223 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HSPB9Q9BQS6 159 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 CXCL1P09341 107 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 SRSF7Q16629 238 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 TMEM171Q8WVE6 324 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 LNP1A1A4G5 178 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 IGHV1-2P23083 117 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 B3GALT5-AS1P59052 145 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 RPL31P62899 125 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 NMSQ5H8A3 153 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BKO60814 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BJP06899 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BOP23527 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BBP33778 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BDP58876 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BCP62807 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST2H2BEQ16778 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BHQ93079 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BNQ99877 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H2BMQ99879 126 aa14.44□□□□□ -0.1
SMARCA4-215ENST00000590574 NAPSAO96009 420 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 HSPE1P61604 102 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 SCGB2A2Q13296 93 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 Q6ZN92 141 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 ZNRF1Q8ND25 227 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 SPSB4Q96A44 273 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 MRPL18Q9H0U6 180 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 A0A1B0GW64 132 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 TFF1P04155 84 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 OR5I1Q13606 314 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 VWA1Q6PCB0 445 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 TGIF2LYQ8IUE0 185 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 TGIF2LXQ8IUE1 241 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 VENTXO95231 258 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 PAFAH1B2P68402 229 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 SSX7Q7RTT5 188 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 AHRRA9YTQ3 701 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 PQLC2Q6ZP29 291 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 WDYHV1Q96HA8 205 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 IGKV3D-15A0A087WSY6 115 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 GRIFINA4D1Z8 144 aa14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 SEBOXQ9HB31 216 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-215ENST00000590574 PRRX1P54821 245 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 RPL23P62829 140 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 STPG3Q8N7X2 389 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 OR4F17Q8NGA8 305 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 C9orf172C9J069 976 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 HIST1H1BP16401 226 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 SP9P0CG40 484 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 ATP5G3P48201 142 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 GFRA1P56159 465 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 VAMP3Q15836 100 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 PAXXQ9BUH6 204 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 GP6Q9HCN6 339 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 KIF26AQ9ULI4 1882 aaPredicted RBP14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 IGHV3-21A0A0B4J1V1 117 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 IQCF6A8MYZ5 107 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 CECR9P0C854 216 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 ASCL4Q6XD76 172 aa14.42□□□□□ -0.1
SMARCA4-215ENST00000590574 IFNL4K9M1U5 179 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 GCHFRP30047 84 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 FXYD3Q14802 87 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 STARD4Q96DR4 205 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 LIME1Q9H400 295 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 A0A1B0GV90 55 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 DIRC3C9JPN6 131 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 ZNF25P17030 456 aaPredicted RBP14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 BRS3P32247 399 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 IBA57Q5T440 356 aaKnown RBP14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 IDI2-AS1Q9NZ38 188 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 CRYBB3P26998 211 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 C1orf185Q5T7R7 199 aa14.41□□□□□ -0.1
SMARCA4-215ENST00000590574 FA2HQ7L5A8 372 aa14.4□□□□□ -0.1
SMARCA4-215ENST00000590574 GATAD1Q8WUU5 269 aa14.4□□□□□ -0.1
SMARCA4-215ENST00000590574 PERPQ96FX8 193 aa14.4□□□□□ -0.1
SMARCA4-215ENST00000590574 NCBP2LA6PVI3 153 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-215ENST00000590574 M0QZK8 103 aa14.4□□□□□ -0.1
SMARCA4-215ENST00000590574 GGCTO75223 188 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-215ENST00000590574 IL6RP08887 468 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms