RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 C10orf55Q5SWW7 151 aa13.72□□□□□ -0.21
H3F3B-209ENST00000589949 TEX45Q8NA69 505 aa13.72□□□□□ -0.21
H3F3B-209ENST00000589949 OR9G4Q8NGQ1 327 aa13.72□□□□□ -0.21
H3F3B-209ENST00000589949 TMEM68Q96MH6 324 aa13.72□□□□□ -0.21
H3F3B-209ENST00000589949 TM2D3Q9BRN9 247 aa13.72□□□□□ -0.21
H3F3B-209ENST00000589949 THAP7Q9BT49 309 aaPredicted RBP13.72□□□□□ -0.21
H3F3B-209ENST00000589949 GAR1Q9NY12 217 aaKnown RBP13.72□□□□□ -0.21
H3F3B-209ENST00000589949 COA4Q9NYJ1 87 aa13.72□□□□□ -0.21
H3F3B-209ENST00000589949 PEF1Q9UBV8 284 aaKnown RBP13.72□□□□□ -0.21
H3F3B-209ENST00000589949 RBM7Q9Y580 266 aaKnown RBP13.72□□□□□ -0.21
H3F3B-209ENST00000589949 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 CSN3P07498 182 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 RRASP10301 218 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 NFYAP23511 347 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-209ENST00000589949 TALDO1P37837 337 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 RANBP1P43487 201 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 RPL30P62888 115 aaKnown RBP13.71□□□□□ -0.21
H3F3B-209ENST00000589949 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
H3F3B-209ENST00000589949 ZNF45Q02386 682 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 TNXAQ16473 311 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 CNPY1Q3B7I2 92 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 SRSF12Q8WXF0 261 aaKnown RBP13.71□□□□□ -0.21
H3F3B-209ENST00000589949 ST6GALNAC5Q9BVH7 336 aa13.71□□□□□ -0.21
H3F3B-209ENST00000589949 ZNF430Q9H8G1 570 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-209ENST00000589949 IZUMO1RA6ND01 250 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 METTL21EPA6NDL7 271 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 SSX5O60225 188 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 SAA1P0DJI8 122 aaPredicted RBP13.7□□□□□ -0.22
H3F3B-209ENST00000589949 GALP22466 123 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 DTYMKP23919 212 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 BRWD1-AS2P59051 145 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 ADAMTSL5Q6ZMM2 481 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 NUDCD2Q8WVJ2 157 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 ADTRPQ96IZ2 230 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 PHB2Q99623 299 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 OR51E2Q9H255 320 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 AKIP1Q9NQ31 210 aa13.7□□□□□ -0.22
H3F3B-209ENST00000589949 TXNL4BQ9NX01 149 aaKnown RBP13.7□□□□□ -0.22
H3F3B-209ENST00000589949 RYR2Q92736 4967 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 TMEM235A6NFC5 223 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 A8MZ25 164 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 OR9G9P0C7N8 305 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 AADACP22760 399 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 FGF9P31371 208 aaPredicted RBP13.69□□□□□ -0.22
H3F3B-209ENST00000589949 CBX3Q13185 183 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 EIF4EBP1Q13541 118 aaPredicted RBP13.69□□□□□ -0.22
H3F3B-209ENST00000589949 VMA21Q3ZAQ7 101 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 OR2B11Q5JQS5 317 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 HACD4Q5VWC8 232 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 C19orf35Q6ZS72 473 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 VKORC1L1Q8N0U8 176 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 ACOT12Q8WYK0 555 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 USMG5Q96IX5 58 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 SSR3Q9UNL2 185 aa13.69□□□□□ -0.22
H3F3B-209ENST00000589949 DYNC2H1Q8NCM8 4307 aaKnown RBP13.68□□□□□ -0.22
H3F3B-209ENST00000589949 TRBV9A0A0B4J1U6 114 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 A0A1B0GW64 132 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 NOTOA8MTQ0 251 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 BMPR1BO00238 502 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 FCGR3BO75015 233 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 HLA-DQB1P01920 261 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 MECP2P51608 486 aaKnown RBP13.68□□□□□ -0.22
H3F3B-209ENST00000589949 LSM3P62310 102 aaKnown RBP13.68□□□□□ -0.22
H3F3B-209ENST00000589949 RHOGP84095 191 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 ZNF645Q8N7E2 425 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 OSR1Q8TAX0 266 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-209ENST00000589949 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 RBMX2Q9Y388 322 aaKnown RBP13.68□□□□□ -0.22
H3F3B-209ENST00000589949 OR2W1Q9Y3N9 320 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 DMRT1Q9Y5R6 373 aa13.68□□□□□ -0.22
H3F3B-209ENST00000589949 LOC100506127A0A0U1RQW1 187 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 E7EUB6 86 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 EDN2P20800 178 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 VBP1P61758 197 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 CDK10Q15131 360 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 CITED4Q96RK1 184 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 ZMAT4Q9H898 229 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 DAPK2Q9UIK4 370 aa13.67□□□□□ -0.22
H3F3B-209ENST00000589949 HMX3A6NHT5 357 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 TUSC2O75896 110 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 CLEC2LP0C7M8 214 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 PTHLHP12272 177 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 NCS1P62166 190 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 SPCS2Q15005 226 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 KCTD9Q7L273 389 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 LGALS14Q8TCE9 139 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 CENPOQ9BU64 300 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 DCSTAMPQ9H295 470 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 RNF167Q9H6Y7 350 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 EDA2RQ9HAV5 297 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 SIGLEC8Q9NYZ4 499 aa13.66□□□□□ -0.22
H3F3B-209ENST00000589949 TEX22C9J3V5 150 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 LYL1P12980 280 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 EXOSC2Q13868 293 aaKnown RBP13.65□□□□□ -0.22
H3F3B-209ENST00000589949 HAGHQ16775 308 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 RPEL1Q2QD12 228 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 CNIH2Q6PI25 160 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 TTC9CQ8N5M4 171 aa13.65□□□□□ -0.22
H3F3B-209ENST00000589949 OR5H6Q8NGV6 325 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms