RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 LYSTQ99698 3801 aa12.1□□□□□ -0.47
ERCC1-206ENST00000588300 SHISA3A0PJX4 238 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 IZUMO1RA6ND01 250 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 BMPR1BO00238 502 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 TUSC2O75896 110 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
ERCC1-206ENST00000588300 RAB3BP20337 219 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 DTYMKP23919 212 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 ATP5G2Q06055 141 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 CDK10Q15131 360 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 SSX1Q16384 188 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 MMD2Q8IY49 270 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 SPIN2AQ99865 258 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 SPIN2BQ9BPZ2 258 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
ERCC1-206ENST00000588300 DNAH1Q9P2D7 4330 aa12.09□□□□□ -0.47
ERCC1-206ENST00000588300 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 TRBV9A0A0B4J1U6 114 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 PRH1P02810 166 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 MECP2P51608 486 aaKnown RBP12.08□□□□□ -0.48
ERCC1-206ENST00000588300 ZNF45Q02386 682 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 ZNF645Q8N7E2 425 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 DCUN1D5Q9BTE7 237 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 ATG5Q9H1Y0 275 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 NDUFB11Q9NX14 153 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 BLOC1S6Q9UL45 172 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 MRPS7Q9Y2R9 242 aaKnown RBP12.08□□□□□ -0.48
ERCC1-206ENST00000588300 PRELID3BQ9Y3B1 194 aa12.08□□□□□ -0.48
ERCC1-206ENST00000588300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.07□□□□□ -0.48
ERCC1-206ENST00000588300 TRDV1A0A1B0GX56 115 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 J3QRK9 145 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 FCGR3BO75015 233 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 CD36P16671 472 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 CD81P60033 236 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 SLC25A42Q86VD7 318 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 LAX1Q8IWV1 398 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 TTC9CQ8N5M4 171 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
ERCC1-206ENST00000588300 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
ERCC1-206ENST00000588300 SLC22A5O76082 557 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 TPPPO94811 219 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
ERCC1-206ENST00000588300 CDNFQ49AH0 187 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 DYNLRB2Q8TF09 96 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 VCX3BQ9H321 246 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 PLEKHA3Q9HB20 300 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 SLC2A8Q9NY64 477 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 ELF5Q9UKW6 265 aaPredicted RBP12.06□□□□□ -0.48
ERCC1-206ENST00000588300 RBMX2Q9Y388 322 aaKnown RBP12.06□□□□□ -0.48
ERCC1-206ENST00000588300 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
ERCC1-206ENST00000588300 OR2J3O76001 311 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 GALP22466 123 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 NFYAP23511 347 aaPredicted RBP12.05□□□□□ -0.48
ERCC1-206ENST00000588300 HSPA13P48723 471 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 OR2B11Q5JQS5 317 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 HACD4Q5VWC8 232 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 C22orf42Q6IC83 251 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 VSTM2AQ8TAG5 236 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 CNBD2Q96M20 576 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 NEURL2Q9BR09 285 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 ST6GALNAC5Q9BVH7 336 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 OR51E2Q9H255 320 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 DCSTAMPQ9H295 470 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 ZNF257Q9Y2Q1 563 aa12.05□□□□□ -0.48
ERCC1-206ENST00000588300 RPL30P62888 115 aaKnown RBP12.04□□□□□ -0.48
ERCC1-206ENST00000588300 LINC00322Q6ZN03 302 aaPredicted RBP12.04□□□□□ -0.48
ERCC1-206ENST00000588300 NR2C2APQ86WQ0 139 aa12.04□□□□□ -0.48
ERCC1-206ENST00000588300 OR4S2Q8NH73 311 aa12.04□□□□□ -0.48
ERCC1-206ENST00000588300 HIPK2Q9H2X6 1198 aa12.04□□□□□ -0.48
ERCC1-206ENST00000588300 RETNQ9HD89 108 aa12.04□□□□□ -0.48
ERCC1-206ENST00000588300 SMIM30A4D0T7 59 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 HMX3A6NHT5 357 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 NPIPB5A8MRT5 1133 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 PPP5D1E7EU14 171 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 GGCTO75223 188 aaKnown RBP12.03□□□□□ -0.48
ERCC1-206ENST00000588300 SCGNO76038 276 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 KBTBD11O94819 623 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 RPL27AP46776 148 aaKnown RBP12.03□□□□□ -0.48
ERCC1-206ENST00000588300 DEFB114Q30KQ6 69 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 CNIH2Q6PI25 160 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 VKORC1L1Q8N0U8 176 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 IL17DQ8TAD2 202 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 NUDCD2Q8WVJ2 157 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 TCTEX1D2Q8WW35 142 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 OR2A7Q96R45 310 aa12.03□□□□□ -0.48
ERCC1-206ENST00000588300 HSD17B10Q99714 261 aaKnown RBP12.03□□□□□ -0.48
ERCC1-206ENST00000588300 IGKV1D-13A0A0B4J2D9 117 aa12.02□□□□□ -0.49
ERCC1-206ENST00000588300 TMEM235A6NFC5 223 aa12.02□□□□□ -0.49
ERCC1-206ENST00000588300 C2orf70A6NJV1 201 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms