RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TMEM210A6NLX4 147 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 IQCF6A8MYZ5 107 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
CCDC43-203ENST00000588210 IFNA1P01562 189 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 SLC38A11Q08AI6 406 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 UBALD1Q8TB05 177 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 OR4C12Q96R67 309 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 OR2J1Q9GZK6 312 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 DOK5Q9P104 306 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 VAX2Q9UIW0 290 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 URGCP-MRPS24S4R325 110 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 MAP1LC3B2A6NCE7 125 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 TGOLN2O43493 480 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 YIF1AO95070 293 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 P0C879 139 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 RAC2P15153 192 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 SELENOVP59797 346 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 MSMPQ1L6U9 139 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 SPANXN5Q5MJ07 72 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 CENPVQ7Z7K6 275 aaPredicted RBP12.12□□□□□ -0.47
CCDC43-203ENST00000588210 C1orf87Q8N0U7 546 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 FGFRL1Q8N441 504 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC43-203ENST00000588210 MRPL37Q9BZE1 423 aaKnown RBP12.12□□□□□ -0.47
CCDC43-203ENST00000588210 MAP1LC3BQ9GZQ8 125 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 HES4Q9HCC6 221 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 HSPB7Q9UBY9 170 aa12.12□□□□□ -0.47
CCDC43-203ENST00000588210 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 TMEM30CPA0ZSE6 113 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 IFITM10A6NMD0 228 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 CDIPTO14735 213 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 CYB5BO43169 146 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HAND1O96004 215 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 CDKN1AP38936 164 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 FGF8P55075 233 aaPredicted RBP12.11□□□□□ -0.47
CCDC43-203ENST00000588210 NDUFA6P56556 154 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 TNFRSF9Q07011 255 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 EIF4EBP1Q13541 118 aaPredicted RBP12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
CCDC43-203ENST00000588210 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
CCDC43-203ENST00000588210 SLC25A40Q8TBP6 338 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 RBKSQ9H477 322 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 SDF2L1Q9HCN8 221 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 DUSP13Q9UII6 198 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
CCDC43-203ENST00000588210 IGLV3-9A0A075B6K5 115 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 CLDN34H7C241 214 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 IGHV2-70P01814 119 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 SELEP16581 610 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 GCH1P30793 250 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 MSMO1Q15800 293 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 MBNL2Q5VZF2 373 aaKnown RBP12.1□□□□□ -0.47
CCDC43-203ENST00000588210 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 KCNIP1Q9NZI2 227 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 KLF3P57682 345 aaPredicted RBP12.1□□□□□ -0.47
CCDC43-203ENST00000588210 KLF14Q8TD94 323 aaPredicted RBP12.1□□□□□ -0.47
CCDC43-203ENST00000588210 FZR1Q9UM11 496 aa12.1□□□□□ -0.47
CCDC43-203ENST00000588210 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 IGHV3-13P01766 116 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 PPOXP50336 477 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
CCDC43-203ENST00000588210 ATP6V1FQ16864 119 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 ALKBH6Q3KRA9 238 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 LRP11Q86VZ4 500 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 PERPQ96FX8 193 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 FAM210BQ96KR6 192 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 AGMATQ9BSE5 352 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 CTDSP1Q9GZU7 261 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
CCDC43-203ENST00000588210 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 S100A2P29034 98 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 ATP5J2P56134 94 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 PSG7Q13046 419 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 CATR1Q13166 79 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 WDR25Q64LD2 544 aaPredicted RBP12.09□□□□□ -0.47
CCDC43-203ENST00000588210 SPNS3Q6ZMD2 512 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 GALMQ96C23 342 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 C5orf30Q96GV9 206 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 OR2D2Q9H210 308 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 MS4A5Q9H3V2 200 aa12.09□□□□□ -0.47
CCDC43-203ENST00000588210 GAR1Q9NY12 217 aaKnown RBP12.09□□□□□ -0.47
CCDC43-203ENST00000588210 AKAP9Q99996 3911 aa12.08□□□□□ -0.48
CCDC43-203ENST00000588210 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms