RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MMP24Q9Y5R2 645 aa9.09□□□□□ -0.95
VMP1-207ENST00000588131 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.09□□□□□ -0.951e-5■■■■□ 21.5
VMP1-207ENST00000588131 WNK2Q9Y3S1 2297 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 MYO9AB2RTY4 2548 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 BOLA2-SMG1P6H3BVE0 249 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 SHOXO15266 292 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 VENTXO95231 258 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 IGLV2-23P01705 113 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 OR9G9P0C7N8 305 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 NQO2P16083 231 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 CD1BP29016 333 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 RAP2BP61225 183 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 RPS16P62249 146 aaKnown RBP9.08□□□□□ -0.96
VMP1-207ENST00000588131 POU2AF1Q16633 256 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 FAM120AOSQ5T036 256 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 CCDC144NLQ6NUI1 221 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 DMBX1Q8NFW5 382 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 OR4D5Q8NGN0 318 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 OR4C13Q8NGP0 309 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 OSR1Q8TAX0 266 aaPredicted RBP9.08□□□□□ -0.96
VMP1-207ENST00000588131 FLYWCH2Q96CP2 140 aaKnown RBP9.08□□□□□ -0.96
VMP1-207ENST00000588131 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
VMP1-207ENST00000588131 HARBI1Q96MB7 349 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 NMES1Q9C002 83 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 MS4A7Q9GZW8 240 aaPredicted RBP9.08□□□□□ -0.96
VMP1-207ENST00000588131 TMEM140Q9NV12 185 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 GSKIPQ9P0R6 139 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 CACNG5Q9UF02 275 aa9.08□□□□□ -0.96
VMP1-207ENST00000588131 TRAV14DV4A0A0A6YYC5 116 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 TRAV3A0A0B4J244 114 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 PIGBOS1A0A0B4J2F0 54 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 A0A1B0GU03 582 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 CD5LO43866 347 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 PITX3O75364 302 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 ATG12O94817 140 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 NXPH3O95157 252 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 HRASP01112 189 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 IGKV1D-33P01593 117 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 IGKV1-33P01594 117 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 SNRNP70P08621 437 aaKnown RBP9.07□□□□□ -0.96
VMP1-207ENST00000588131 SAA1P0DJI8 122 aaPredicted RBP9.07□□□□□ -0.96
VMP1-207ENST00000588131 CNTFRP26992 372 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 ERVK-16P61578 105 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 SMCO1Q147U7 214 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 LRRC37A5PQ49AS3 106 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 THOC7Q6I9Y2 204 aaKnown RBP9.07□□□□□ -0.96
VMP1-207ENST00000588131 OR4A47Q6IF82 309 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 H2BFWTQ7Z2G1 175 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 BCL6BQ8N143 479 aaPredicted RBP9.07□□□□□ -0.96
VMP1-207ENST00000588131 OR2T35Q8NGX2 323 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 PPP1R1CQ8WVI7 109 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 RHOVQ96L33 236 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 SPIN2AQ99865 258 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 SPIN2BQ9BPZ2 258 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 NSG2Q9Y328 171 aa9.07□□□□□ -0.96
VMP1-207ENST00000588131 ZNF469Q96JG9 3925 aaPredicted RBP9.07□□□□□ -0.96
VMP1-207ENST00000588131 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 MDFIC2A0A1B0GVS7 189 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 FAM90A9PA6NNJ1 464 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 SCGB1D2O95969 90 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 IL6RP08887 468 aaPredicted RBP9.06□□□□□ -0.96
VMP1-207ENST00000588131 SLC25A6P12236 298 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 OR2B8PP59922 312 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 RAB32Q13637 225 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 HNF4GQ14541 408 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 CXorf66Q5JRM2 361 aaPredicted RBP9.06□□□□□ -0.96
VMP1-207ENST00000588131 IL17RELQ6ZVW7 336 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 PUSL1Q8N0Z8 303 aaKnown RBP9.06□□□□□ -0.96
VMP1-207ENST00000588131 OR1S1Q8NH92 325 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 NANPQ8TBE9 248 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 ASB13Q8WXK3 278 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
VMP1-207ENST00000588131 MEGF9Q9H1U4 602 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 NUP50Q9UKX7 468 aa9.06□□□□□ -0.96
VMP1-207ENST00000588131 H0YIZ8 118 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 UPK2O00526 184 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 SLC25A17O43808 307 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 MOSP00540 346 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 MBPP02686 304 aaPredicted RBP9.05□□□□□ -0.96
VMP1-207ENST00000588131 CRYGBP07316 175 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 MYOD1P15172 320 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 S100A10P60903 97 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 UBE2KP61086 200 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 CYCSP99999 105 aaKnown RBP9.05□□□□□ -0.96
VMP1-207ENST00000588131 RELBQ01201 579 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 EBI3Q14213 229 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 HES1Q14469 280 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 PSG5Q15238 335 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 Q8N6K4 173 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 OR11H4Q8NGC9 324 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 OR2T10Q8NGZ9 312 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 C22orf15Q8WYQ4 148 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 SMR3AQ99954 134 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 QTRT1Q9BXR0 403 aaKnown RBP9.05□□□□□ -0.96
VMP1-207ENST00000588131 YAE1D1Q9NRH1 226 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 BET1LQ9NYM9 111 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 LSM5Q9Y4Y9 91 aaKnown RBP9.05□□□□□ -0.96
VMP1-207ENST00000588131 ITPR3Q14573 2671 aa9.05□□□□□ -0.96
VMP1-207ENST00000588131 K7EPK0 472 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms