RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 BET1O15155 118 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 FABP7O15540 132 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 DEDDO75618 318 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 SPDEFO95238 335 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 TNFAIP8O95379 198 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 GSTT2P0CG29 244 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 GSTT2BP0CG30 244 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 EWSR1Q01844 656 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS4B-202ENST00000588059 FXYD3Q14802 87 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 TATDN3Q17R31 274 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 RPEL1Q2QD12 228 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 CDNFQ49AH0 187 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 IDNKQ5T6J7 187 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 BVESQ8NE79 360 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 OR4A4PQ8NGN8 299 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 LGALS14Q8TCE9 139 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 RNF5Q99942 180 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 CENPOQ9BU64 300 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 RDH8Q9NYR8 311 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 PEMTQ9UBM1 199 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 ZNF230Q9UIE0 474 aaPredicted RBP8.31□□□□□ -1.08
VPS4B-202ENST00000588059 ZNF221Q9UK13 617 aa8.31□□□□□ -1.08
VPS4B-202ENST00000588059 ITGB1BP1O14713 200 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 RBMXL2O75526 392 aaKnown RBP8.3□□□□□ -1.08
VPS4B-202ENST00000588059 IGKV1-16P04430 117 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 AADACP22760 399 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 SERPINB10P48595 397 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 ARL6IP1Q15041 203 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 TIMM50Q3ZCQ8 353 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 IGSF11Q5DX21 431 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 CEMP1Q6PRD7 247 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-202ENST00000588059 DRAXINQ8NBI3 349 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-202ENST00000588059 OR10J5Q8NHC4 309 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 GATAD1Q8WUU5 269 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 TSNAXQ99598 290 aaKnown RBP8.3□□□□□ -1.08
VPS4B-202ENST00000588059 GINS4Q9BRT9 223 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 AGMATQ9BSE5 352 aa8.3□□□□□ -1.08
VPS4B-202ENST00000588059 TINAGL1Q9GZM7 467 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-202ENST00000588059 ELF5Q9UKW6 265 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-202ENST00000588059 RBM7Q9Y580 266 aaKnown RBP8.3□□□□□ -1.08
VPS4B-202ENST00000588059 AIREO43918 545 aa8.29□□□□□ -1.08
VPS4B-202ENST00000588059 SCGNO76038 276 aa8.29□□□□□ -1.08
VPS4B-202ENST00000588059 LSM3P62310 102 aaKnown RBP8.29□□□□□ -1.08
VPS4B-202ENST00000588059 DEFB114Q30KQ6 69 aa8.29□□□□□ -1.08
VPS4B-202ENST00000588059 USMG5Q96IX5 58 aa8.29□□□□□ -1.08
VPS4B-202ENST00000588059 ZC4H2Q9NQZ6 224 aa8.29□□□□□ -1.08
VPS4B-202ENST00000588059 RHBDL2Q9NX52 303 aa8.29□□□□□ -1.08
VPS4B-202ENST00000588059 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 TMEM235A6NFC5 223 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 M0R1X1 148 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 BMPR1BO00238 502 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 PROP1O75360 226 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 EDN2P20800 178 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 TGFBR1P36897 503 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 GNG2P59768 71 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 RPS16P62249 146 aaKnown RBP8.28□□□□□ -1.08
VPS4B-202ENST00000588059 PJVKQ0ZLH3 352 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 GUCA2BQ16661 112 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 HACD4Q5VWC8 232 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 OR5H6Q8NGV6 325 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 NUDCD2Q8WVJ2 157 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 SNAPC3Q92966 411 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 YIPF6Q96EC8 236 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 CABLES2Q9BTV7 478 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 OR2D2Q9H210 308 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 ETV7Q9Y603 341 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
VPS4B-202ENST00000588059 TRAV18A0A075B6X5 111 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 IGKV1D-8A0A087WSZ0 117 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 TRBV6-7A0A0A0MS04 114 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 J3QRK9 145 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 APOA2P02652 100 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 DTYMKP23919 212 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 LGALS7P47929 136 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 LINC00205P59089 165 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 TNFRSF9Q07011 255 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 PDPNQ86YL7 162 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 ZNF383Q8NA42 475 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
VPS4B-202ENST00000588059 WDR89Q96FK6 387 aaPredicted RBP8.27□□□□□ -1.09
VPS4B-202ENST00000588059 TMEM68Q96MH6 324 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 GGTLC1Q9BX51 225 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 COA4Q9NYJ1 87 aa8.27□□□□□ -1.09
VPS4B-202ENST00000588059 KLK5Q9Y337 293 aaPredicted RBP8.27□□□□□ -1.09
VPS4B-202ENST00000588059 C2orf70A6NJV1 201 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 IGLV2-23P01705 113 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 CRYGBP07316 175 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 FOLR2P14207 255 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 KIR2DS2P43631 304 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 SCAND1P57086 179 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 EXOSC2Q13868 293 aaKnown RBP8.26□□□□□ -1.09
VPS4B-202ENST00000588059 LGALS9CQ6DKI2 356 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 LYG2Q86SG7 212 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 CROCCP3Q8IVE0 287 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 H1FOOQ8IZA3 346 aaPredicted RBP8.26□□□□□ -1.09
VPS4B-202ENST00000588059 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.26□□□□□ -1.09
VPS4B-202ENST00000588059 ADAD2Q8NCV1 583 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms