RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 MCEMP1Q8IX19 187 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 C11orf52Q96A22 123 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 LAMA1P25391 3075 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 FAM90A9PA6NNJ1 464 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 MMP23AO75900 390 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 OR5I1Q13606 314 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 BATFQ16520 125 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 RPEL1Q2QD12 228 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 GNB1LQ9BYB4 327 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 GP6Q9HCN6 339 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 OTX2P32243 289 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 TMPRSS3P57727 454 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 OR1C1Q15619 314 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 SPATA46Q5T0L3 261 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 TREML4Q6UXN2 200 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 NANOS1Q8WY41 292 aaKnown RBP13.72□□□□□ -0.21
RANBP3-209ENST00000587411 CDIPTO14735 213 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 MT-CO2P00403 227 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 MT-ND6P03923 174 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 HNF1AP20823 631 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 GGTLC1Q9BX51 225 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 B4GALT7Q9UBV7 327 aa13.72□□□□□ -0.21
RANBP3-209ENST00000587411 SNURFLB1AK76 121 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 K7EN84 100 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 IER3P46695 156 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 RPL31P62899 125 aaKnown RBP13.71□□□□□ -0.21
RANBP3-209ENST00000587411 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 KRTCAP3Q53RY4 240 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 LYSMD4Q5XG99 296 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 LRP11Q86VZ4 500 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 MGST2Q99735 147 aa13.71□□□□□ -0.21
RANBP3-209ENST00000587411 YTHDF2Q9Y5A9 579 aaKnown RBP13.71□□□□□ -0.21
RANBP3-209ENST00000587411 TRGV10A0A0A0MS01 117 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 SLC17A3O00476 420 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 PSPNO60542 156 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 GPX1P07203 203 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 GCHFRP30047 84 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 COX19Q49B96 90 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 WDR73Q6P4I2 378 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 MMD2Q8IY49 270 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 FAM173AQ9BQD7 235 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 FBXL7Q9UJT9 491 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 SLC45A2Q9UMX9 530 aa13.71□□□□□ -0.22
RANBP3-209ENST00000587411 SPEGQ15772 3267 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 SAA2-SAA4A0A096LPE2 208 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 RAB7AP51149 207 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 GABRA6Q16445 453 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 OR10J3Q5JRS4 329 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 DCAF12Q5T6F0 453 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 C1orf174Q8IYL3 243 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 LINC00473A8K010 186 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 DIRC3C9JPN6 131 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 RRHO14718 337 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 PLGLB1Q02325 96 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 PSG7Q13046 419 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 ZNF766Q5HY98 468 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 MIC13Q5XKP0 118 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 OR2M7Q8NG81 312 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 OR52E5Q8NH55 327 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 EAF1Q96JC9 268 aaPredicted RBP13.7□□□□□ -0.22
RANBP3-209ENST00000587411 SLC35E1Q96K37 410 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 SFXN3Q9BWM7 321 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 OPN3Q9H1Y3 402 aaPredicted RBP13.7□□□□□ -0.22
RANBP3-209ENST00000587411 HES4Q9HCC6 221 aa13.7□□□□□ -0.22
RANBP3-209ENST00000587411 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-209ENST00000587411 CTRLP40313 264 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 KRTDAPP60985 99 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 SUMO1P63165 101 aaKnown RBP13.69□□□□□ -0.22
RANBP3-209ENST00000587411 HTD2P86397 168 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 TBC1D28Q2M2D7 210 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 DMRTA1Q5VZB9 504 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 MS4A5Q9H3V2 200 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 K7ESF4 209 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 NTN3O00634 580 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-209ENST00000587411 OR9G9P0C7N8 305 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 RHOBP62745 196 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 C21orf62-AS1Q17RA5 79 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 MDP1Q86V88 176 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 Q8N976 141 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 GNB4Q9HAV0 340 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 MSL2Q9HCI7 577 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 UQCR10Q9UDW1 63 aa13.69□□□□□ -0.22
RANBP3-209ENST00000587411 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 F2Z2F3 143 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 SIAH2O43255 324 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 OR10J4P0C629 311 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 AREGP15514 252 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 CHRNB4P30926 498 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 CEBPDP49716 269 aaPredicted RBP13.68□□□□□ -0.22
RANBP3-209ENST00000587411 FAM53AQ6NSI3 398 aaPredicted RBP13.68□□□□□ -0.22
RANBP3-209ENST00000587411 HEYLQ9NQ87 328 aaPredicted RBP13.68□□□□□ -0.22
RANBP3-209ENST00000587411 ARL2-SNX15V9GYD0 113 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 V9GYV3 84 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 CXCL12P48061 93 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 AESQ08117 197 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 MRPL49Q13405 166 aaKnown RBP13.68□□□□□ -0.22
RANBP3-209ENST00000587411 SPINK14Q6IE38 97 aa13.68□□□□□ -0.22
RANBP3-209ENST00000587411 C11orf42Q8N5U0 333 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms