RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 Q8N7P7 452 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 BEND2Q8NDZ0 799 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 TMED6Q8WW62 240 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 QTRT1Q9BXR0 403 aaKnown RBP16.14■□□□□ 0.17
TRIM47-204ENST00000587339 SLC25A32Q9H2D1 315 aa16.14■□□□□ 0.17
TRIM47-204ENST00000587339 M0R1W7 72 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 CLINT1Q14677 625 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 OR5C1Q8NGR4 320 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 RBMXL1Q96E39 390 aaKnown RBP16.13■□□□□ 0.17
TRIM47-204ENST00000587339 NABP2Q9BQ15 211 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 WFDC1Q9HC57 220 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 LINC00862A6NCI5 91 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 IFNA17P01571 189 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 SULT1A1P50225 295 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 RELBQ01201 579 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 POU2AF1Q16633 256 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 AARDQ4LEZ3 155 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 SPANXN5Q5MJ07 72 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 EIF5AL1Q6IS14 154 aaKnown RBP16.13■□□□□ 0.17
TRIM47-204ENST00000587339 DTD1Q8TEA8 209 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 AIFM2Q9BRQ8 373 aa16.13■□□□□ 0.17
TRIM47-204ENST00000587339 CEBPZOSA8MTT3 80 aa16.12■□□□□ 0.17
TRIM47-204ENST00000587339 ZFP36P26651 326 aaKnown RBP16.12■□□□□ 0.17
TRIM47-204ENST00000587339 TMEM267Q0VDI3 215 aaPredicted RBP16.12■□□□□ 0.17
TRIM47-204ENST00000587339 ZNF266Q14584 549 aa16.12■□□□□ 0.17
TRIM47-204ENST00000587339 PDZD9Q8IXQ8 264 aa16.12■□□□□ 0.17
TRIM47-204ENST00000587339 OSR1Q8TAX0 266 aaPredicted RBP16.12■□□□□ 0.17
TRIM47-204ENST00000587339 ZDHHC16Q969W1 377 aa16.12■□□□□ 0.17
TRIM47-204ENST00000587339 CIB3Q96Q77 187 aaPredicted RBP16.12■□□□□ 0.17
TRIM47-204ENST00000587339 PCGF1Q9BSM1 259 aa16.12■□□□□ 0.17
TRIM47-204ENST00000587339 SIRT7Q9NRC8 400 aa16.12■□□□□ 0.17
TRIM47-204ENST00000587339 UTP20O75691 2785 aaKnown RBP16.12■□□□□ 0.17
TRIM47-204ENST00000587339 TRAV3A0A0B4J244 114 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 BUB1B-PAK6H3BSN5 160 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 SHOXO15266 292 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 DYNLT3P51808 116 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 PDPNQ86YL7 162 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 PNKDQ8N490 385 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 CLDND2Q8NHS1 167 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 LHX4Q969G2 390 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 FLYWCH2Q96CP2 140 aaKnown RBP16.11■□□□□ 0.17
TRIM47-204ENST00000587339 CACFD1Q9UGQ2 172 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 ENSAO43768 121 aaKnown RBP16.11■□□□□ 0.17
TRIM47-204ENST00000587339 METTL15P1P0C7V9 234 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 S100A1P23297 94 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 SPINK9Q5DT21 86 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 ZNF429Q86V71 674 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 OR4C13Q8NGP0 309 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 NUP50Q9UKX7 468 aa16.11■□□□□ 0.17
TRIM47-204ENST00000587339 AMMECR1Q9Y4X0 333 aaPredicted RBP16.11■□□□□ 0.17
TRIM47-204ENST00000587339 LRRK2Q5S007 2527 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 C15orf61A6NNL5 157 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 SRRM4A7MD48 611 aaKnown RBP16.1■□□□□ 0.17
TRIM47-204ENST00000587339 FBXO24O75426 580 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 MC5RP33032 325 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 RAB13P51153 203 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 ATP5J2P56134 94 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 SPCS3P61009 180 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 LMO4P61968 165 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 LCN2P80188 198 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 OR4P4Q8NGL7 312 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 OR1S2Q8NGQ3 325 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 OR52E5Q8NH55 327 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 FAM168AQ92567 244 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 HARBI1Q96MB7 349 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 WASHC3Q9Y3C0 194 aa16.1■□□□□ 0.17
TRIM47-204ENST00000587339 PRTN3P24158 256 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 TMEM177Q53S58 311 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 C1orf122Q6ZSJ8 110 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 KIR3DL3Q8N743 410 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 RNF141Q8WVD5 230 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 ARV1Q9H2C2 271 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 BARX1Q9HBU1 254 aaPredicted RBP16.09■□□□□ 0.17
TRIM47-204ENST00000587339 FAM208BQ5VWN6 2430 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 OR11H6Q8NGC7 330 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 CXorf58Q96LI9 332 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 CITED4Q96RK1 184 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 PIMREGQ9BSJ6 248 aa16.09■□□□□ 0.17
TRIM47-204ENST00000587339 TACC2O95359 2948 aa16.08■□□□□ 0.17
TRIM47-204ENST00000587339 A8MXK9 166 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 SAA1P0DJI8 122 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-204ENST00000587339 HBG1P69891 147 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 HBG2P69892 147 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 PDLIM3Q53GG5 364 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-204ENST00000587339 LRRC20Q8TCA0 184 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 MARVELD3Q96A59 401 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 RPEQ96AT9 228 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 GINS3Q9BRX5 216 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 TMEM14BQ9NUH8 114 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 FOXA2Q9Y261 457 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-204ENST00000587339 STRAPQ9Y3F4 350 aaKnown RBP16.08■□□□□ 0.16
TRIM47-204ENST00000587339 INSIG2Q9Y5U4 225 aa16.08■□□□□ 0.16
TRIM47-204ENST00000587339 KMT2BQ9UMN6 2715 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-204ENST00000587339 NDUFS8O00217 210 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 LY86O95711 162 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 ARG1P05089 322 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 IL6RP08887 468 aaPredicted RBP16.07■□□□□ 0.16
TRIM47-204ENST00000587339 CLEC2AQ6UVW9 174 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 TMEM14EPQ6UXP3 125 aa16.07■□□□□ 0.16
TRIM47-204ENST00000587339 HSD17B11Q8NBQ5 300 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms