RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 FAM3DQ96BQ1 224 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 ARHGAP5-AS1Q96IT6 56 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 OR5B12Q96R08 314 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 CMSS1Q9BQ75 279 aaKnown RBP8.32□□□□□ -1.08
ZNF540-205ENST00000587220 FBXL15Q9H469 300 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 TAS2R8Q9NYW2 309 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 OR1A1Q9P1Q5 309 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 U3KQ87 197 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 V9GY05 133 aa8.32□□□□□ -1.08
ZNF540-205ENST00000587220 A0A1W2PN81 502 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 RRHO14718 337 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 RBBP9O75884 186 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 SLC22A5O76082 557 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 NDUFA3O95167 84 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 IGLV1-40P01703 118 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 SCTP09683 121 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 CT45A6P0DMU7 189 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 CT45A5P0DMU8 189 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 CT45A7P0DMV0 189 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 CD37P11049 281 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 PPIFP30405 207 aaKnown RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 FAUP35544 74 aaKnown RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 CHRNA7P36544 502 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 ECI1P42126 302 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 ZNF616Q08AN1 781 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 TMEM267Q0VDI3 215 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 C2orf76Q3KRA6 126 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 ZNF260Q3ZCT1 412 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 CLLU1Q5K131 121 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 HES5Q5TA89 166 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 ZNF660Q6AZW8 331 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 C11orf87Q6NUJ2 197 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 GLDNQ6ZMI3 551 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 CCDC28AQ8IWP9 274 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 UXS1Q8NBZ7 420 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 OR11H7Q8NGC8 314 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 OR5H6Q8NGV6 325 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 LGALS14Q8TCE9 139 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 FCAMRQ8WWV6 532 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 S100A16Q96FQ6 103 aaKnown RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 GFI1Q99684 422 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 PECRQ9BY49 303 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 PARP12Q9H0J9 701 aaKnown RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 C20orf85Q9H1P6 137 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 KLK15Q9H2R5 256 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 GNB4Q9HAV0 340 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 GPN1Q9HCN4 374 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 Q9N2K0 584 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 RNF150Q9ULK6 438 aa8.31□□□□□ -1.08
ZNF540-205ENST00000587220 FOXA2Q9Y261 457 aaPredicted RBP8.31□□□□□ -1.08
ZNF540-205ENST00000587220 ANKRD20A5PA0PJZ0 165 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 TRDCB7Z8K6 153 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 H0YJW9 148 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 APOA2P02652 100 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 GIPP09681 153 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-205ENST00000587220 CD3GP09693 182 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
ZNF540-205ENST00000587220 RAB9AP51151 201 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 RAP2BP61225 183 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 CX3CL1P78423 397 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 FHL3Q13643 280 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 TCTEX1D1Q8N7M0 179 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 ZNF491Q8N8L2 437 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 MYOZ3Q8TDC0 251 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 GIMAP1Q8WWP7 306 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 RAB3CQ96E17 227 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 PRR25Q96S07 402 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 CLCC1Q96S66 551 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 TSNAXQ99598 290 aaKnown RBP8.3□□□□□ -1.08
ZNF540-205ENST00000587220 AGMATQ9BSE5 352 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 ZNF436Q9C0F3 470 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-205ENST00000587220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.3□□□□□ -1.08
ZNF540-205ENST00000587220 MED9Q9NWA0 146 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 METTL1Q9UBP6 276 aaKnown RBP8.3□□□□□ -1.08
ZNF540-205ENST00000587220 RAB22AQ9UL26 194 aa8.3□□□□□ -1.08
ZNF540-205ENST00000587220 TMEM272A0A1B0GTI8 110 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 FOXI3A8MTJ6 420 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-205ENST00000587220 M0R1X1 148 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 LY86O95711 162 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 TMEM50BP56557 158 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 GNB1P62873 340 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 RUNX1Q01196 453 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 ACTBL2Q562R1 376 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 PLAC9Q5JTB6 97 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 PPP1R27Q86WC6 154 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 PDPNQ86YL7 162 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 ZNF680Q8NEM1 530 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 OR5AN1Q8NGI8 311 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 OR4A4PQ8NGN8 299 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 OR10J5Q8NHC4 309 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 CASTOR1Q8WTX7 329 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 PTX4Q96A99 478 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 SLC25A38Q96DW6 304 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 RNF5Q99942 180 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 HRASLSQ9HDD0 168 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 RDH8Q9NYR8 311 aa8.29□□□□□ -1.08
ZNF540-205ENST00000587220 TRAV6A0A075B6T7 132 aa8.28□□□□□ -1.08
ZNF540-205ENST00000587220 A0A0A6YYH2 397 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms