RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 A0A0G2JLM5 398 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 MPPED1O15442 326 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 XRCC3O43542 346 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 CREBL2O60519 120 aaPredicted RBP13.65□□□□□ -0.22
TPM4-206ENST00000587201 SAP30O75446 220 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 AADACP22760 399 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 CDK10Q15131 360 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 SAMD12Q8N8I0 201 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 SECTM1Q8WVN6 248 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 SRSF12Q8WXF0 261 aaKnown RBP13.65□□□□□ -0.22
TPM4-206ENST00000587201 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
TPM4-206ENST00000587201 COA4Q9NYJ1 87 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 TAS2R8Q9NYW2 309 aa13.65□□□□□ -0.22
TPM4-206ENST00000587201 ACTL6BO94805 426 aa13.64□□□□□ -0.23
TPM4-206ENST00000587201 LY86O95711 162 aa13.64□□□□□ -0.23
TPM4-206ENST00000587201 ZNF66Q6ZN08 573 aa13.64□□□□□ -0.23
TPM4-206ENST00000587201 OR13F1Q8NGS4 319 aa13.64□□□□□ -0.23
TPM4-206ENST00000587201 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
TPM4-206ENST00000587201 TINAGL1Q9GZM7 467 aaPredicted RBP13.64□□□□□ -0.23
TPM4-206ENST00000587201 RANGRFQ9HD47 186 aaPredicted RBP13.64□□□□□ -0.23
TPM4-206ENST00000587201 IFT46Q9NQC8 304 aa13.64□□□□□ -0.23
TPM4-206ENST00000587201 CCL28Q9NRJ3 127 aa13.64□□□□□ -0.23
TPM4-206ENST00000587201 ZNF256Q9Y2P7 627 aaPredicted RBP13.64□□□□□ -0.23
TPM4-206ENST00000587201 TNFSF12O43508 249 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 PPYP01298 95 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 FXYD4P59646 89 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 DEFA5Q01523 94 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 EIF4EBP1Q13541 118 aaPredicted RBP13.63□□□□□ -0.23
TPM4-206ENST00000587201 TMEM69Q5SWH9 247 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 MMD2Q8IY49 270 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 VKORC1L1Q8N0U8 176 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 OR5AP2Q8NGF4 316 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 SNAPC3Q92966 411 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 SLC25A46Q96AG3 418 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 GPHA2Q96T91 129 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 B9D2Q9BPU9 175 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 FUNDC2Q9BWH2 189 aa13.63□□□□□ -0.23
TPM4-206ENST00000587201 ANKRD34BA5PLL1 514 aa13.62□□□□□ -0.23
TPM4-206ENST00000587201 TRIM64CA6NLI5 447 aa13.62□□□□□ -0.23
TPM4-206ENST00000587201 BRI3O95415 125 aa13.62□□□□□ -0.23
TPM4-206ENST00000587201 OR9G9P0C7N8 305 aa13.62□□□□□ -0.23
TPM4-206ENST00000587201 TAS2R20P59543 309 aa13.62□□□□□ -0.23
TPM4-206ENST00000587201 MSMO1Q15800 293 aa13.62□□□□□ -0.23
TPM4-206ENST00000587201 SLC5A7Q9GZV3 580 aa13.62□□□□□ -0.23
TPM4-206ENST00000587201 OR2A4O95047 310 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 KIR2DS2P43631 304 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 VBP1P61758 197 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 NCS1P62166 190 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 ACSM6Q6P461 480 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 ZBTB34Q8NCN2 500 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 ADAD2Q8NCV1 583 aaKnown RBP13.61□□□□□ -0.23
TPM4-206ENST00000587201 VSTM2AQ8TAG5 236 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 GIMAP1Q8WWP7 306 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 KCTD12Q96CX2 325 aaKnown RBP13.61□□□□□ -0.23
TPM4-206ENST00000587201 USMG5Q96IX5 58 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 OR2A7Q96R45 310 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 SPIN2AQ99865 258 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 SPIN2BQ9BPZ2 258 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 COMMD3Q9UBI1 195 aa13.61□□□□□ -0.23
TPM4-206ENST00000587201 LSM4Q9Y4Z0 139 aaKnown RBP13.61□□□□□ -0.23
TPM4-206ENST00000587201 KBTBD11O94819 623 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 HRASP01112 189 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 ZP3P21754 424 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 BRWD1-AS2P59051 145 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 VAX1Q5SQQ9 334 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 C10orf55Q5SWW7 151 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 C11orf87Q6NUJ2 197 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 SSX9Q7RTT3 188 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 TMEM17Q86X19 198 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 OR4C12Q96R67 309 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 ELOVL1Q9BW60 279 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 EHFQ9NZC4 300 aa13.6□□□□□ -0.23
TPM4-206ENST00000587201 PRSS3P35030 304 aa13.59□□□□□ -0.23
TPM4-206ENST00000587201 HERV-K104P61576 105 aa13.59□□□□□ -0.23
TPM4-206ENST00000587201 CATR1Q13166 79 aa13.59□□□□□ -0.23
TPM4-206ENST00000587201 DYRK1AQ13627 763 aa13.59□□□□□ -0.23
TPM4-206ENST00000587201 SPAG16Q8N0X2 631 aa13.59□□□□□ -0.23
TPM4-206ENST00000587201 PUSL1Q8N0Z8 303 aaKnown RBP13.59□□□□□ -0.23
TPM4-206ENST00000587201 OR6Q1Q8NGQ2 317 aa13.59□□□□□ -0.23
TPM4-206ENST00000587201 TMEM167AQ8TBQ9 72 aa13.59□□□□□ -0.23
TPM4-206ENST00000587201 PEF1Q9UBV8 284 aaKnown RBP13.59□□□□□ -0.23
TPM4-206ENST00000587201 PMP2P02689 132 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 PRH1P02810 166 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 EIF4EP06730 217 aaKnown RBP13.58□□□□□ -0.24
TPM4-206ENST00000587201 SPNP16150 400 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 RPL27AP46776 148 aaKnown RBP13.58□□□□□ -0.24
TPM4-206ENST00000587201 RFX2P48378 723 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 ZNF343Q6P1L6 599 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 ZNF818PQ6ZRF7 136 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 TTC9CQ8N5M4 171 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 ANAPC10Q9UM13 185 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 TNCP24821 2201 aa13.58□□□□□ -0.24
TPM4-206ENST00000587201 DNAH9Q9NYC9 4486 aa13.57□□□□□ -0.24
TPM4-206ENST00000587201 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
TPM4-206ENST00000587201 HMX3A6NHT5 357 aa13.57□□□□□ -0.24
TPM4-206ENST00000587201 SULT1C2O00338 296 aa13.57□□□□□ -0.24
TPM4-206ENST00000587201 RBMXL2O75526 392 aaKnown RBP13.57□□□□□ -0.24
TPM4-206ENST00000587201 MAS1LP35410 378 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms