RNA–Protein interactions for RNA: ENST00000586435.1

LIG3-209, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-209ENST00000586435 ACOT13Q9NPJ3 140 aa8.97□□□□□ -0.97
LIG3-209ENST00000586435 ZC4H2Q9NQZ6 224 aa8.97□□□□□ -0.97
LIG3-209ENST00000586435 TPRKBQ9Y3C4 175 aa8.97□□□□□ -0.97
LIG3-209ENST00000586435 RBM7Q9Y580 266 aaKnown RBP8.97□□□□□ -0.97
LIG3-209ENST00000586435 ZNF785A8K8V0 405 aa8.96□□□□□ -0.98
LIG3-209ENST00000586435 SAA1P0DJI8 122 aaPredicted RBP8.96□□□□□ -0.98
LIG3-209ENST00000586435 RAB6AP20340 208 aa8.96□□□□□ -0.98
LIG3-209ENST00000586435 HES5Q5TA89 166 aa8.96□□□□□ -0.98
LIG3-209ENST00000586435 SLC25A42Q86VD7 318 aa8.96□□□□□ -0.98
LIG3-209ENST00000586435 MMD2Q8IY49 270 aa8.96□□□□□ -0.98
LIG3-209ENST00000586435 ZNF430Q9H8G1 570 aaPredicted RBP8.96□□□□□ -0.98
LIG3-209ENST00000586435 RETNQ9HD89 108 aa8.96□□□□□ -0.98
LIG3-209ENST00000586435 TECRQ9NZ01 308 aaKnown RBP8.96□□□□□ -0.98
LIG3-209ENST00000586435 DMRT1Q9Y5R6 373 aa8.96□□□□□ -0.98
LIG3-209ENST00000586435 TRAV1-2A0A0B4J238 106 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 RBMY1BA6NDE4 496 aaKnown RBP8.95□□□□□ -0.98
LIG3-209ENST00000586435 RBMY1EA6NEQ0 496 aaKnown RBP8.95□□□□□ -0.98
LIG3-209ENST00000586435 C2orf70A6NJV1 201 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 LGALS9O00182 355 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 PDCD5O14737 125 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 RGS10O43665 173 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 ACTL6BO94805 426 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 PRH1P02810 166 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 CD7P09564 240 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 RBMY1DP0C7P1 496 aaKnown RBP8.95□□□□□ -0.98
LIG3-209ENST00000586435 GNB3P16520 340 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 KIR2DS2P43631 304 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 ARL6IP1Q15041 203 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 SSX1Q16384 188 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 DEFB114Q30KQ6 69 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 ZNF645Q8N7E2 425 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 DYNLRB2Q8TF09 96 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 MAFIPQ8WZ33 124 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 MGLLQ99685 303 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 FAM110AQ9BQ89 295 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 ZNF257Q9Y2Q1 563 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 HYDINQ4G0P3 5121 aa8.95□□□□□ -0.98
LIG3-209ENST00000586435 IGKV1D-8A0A087WSZ0 117 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 METTL21EPA6NDL7 271 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 IFITM5A6NNB3 132 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 GGCTO75223 188 aaKnown RBP8.94□□□□□ -0.98
LIG3-209ENST00000586435 DTYMKP23919 212 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 C15orf32Q32M92 178 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 KCTD9Q7L273 389 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 PRSS48Q7RTY5 328 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 DEFB125Q8N687 156 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 SRD5A3Q9H8P0 318 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 MRPS7Q9Y2R9 242 aaKnown RBP8.94□□□□□ -0.98
LIG3-209ENST00000586435 PRELID3BQ9Y3B1 194 aa8.94□□□□□ -0.98
LIG3-209ENST00000586435 A0A075B6Q4 140 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 NPIPB5A8MRT5 1133 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 A8MWP6 167 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 OR11H12B2RN74 326 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 TEX22C9J3V5 150 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 FCGR3BO75015 233 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 OR2J3O76001 311 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 SLC22A5O76082 557 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 CTXN2P0C2S0 81 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 FOLR2P14207 255 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 CD36P16671 472 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 CRHBPP24387 322 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 TALDO1P37837 337 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 OR10A3P58181 314 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 ARFRP1Q13795 201 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 TBCEQ15813 527 aaPredicted RBP8.93□□□□□ -0.98
LIG3-209ENST00000586435 KLK9Q2XQG4 91 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 C10orf55Q5SWW7 151 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 GPHB5Q86YW7 130 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 VSTM2AQ8TAG5 236 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 WFDC10AQ9H1F0 79 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 OR51E2Q9H255 320 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 KLK9Q9UKQ9 250 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 RBMX2Q9Y388 322 aaKnown RBP8.93□□□□□ -0.98
LIG3-209ENST00000586435 OR2W1Q9Y3N9 320 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 ALMS1Q8TCU4 4167 aa8.93□□□□□ -0.98
LIG3-209ENST00000586435 PPP5D1E7EU14 171 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 KBTBD11O94819 623 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 IGLV2-14P01704 120 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 HLA-DQB1P01920 261 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 MAS1LP35410 378 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 MAP2K4P45985 399 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 AQP4P55087 323 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 SLC16A13Q7RTY0 426 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 PUSL1Q8N0Z8 303 aaKnown RBP8.92□□□□□ -0.98
LIG3-209ENST00000586435 OR4S2Q8NH73 311 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 TMEM167AQ8TBQ9 72 aa8.92□□□□□ -0.98
LIG3-209ENST00000586435 HSD17B10Q99714 261 aaKnown RBP8.92□□□□□ -0.98
LIG3-209ENST00000586435 HMX3A6NHT5 357 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 CRYGCP07315 174 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 ZNF735P0CB33 412 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 RAB3BP20337 219 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 EDN2P20800 178 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 GALP22466 123 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 CBLN1P23435 193 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 MYL9P24844 172 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 RPL27AP46776 148 aaKnown RBP8.91□□□□□ -0.98
LIG3-209ENST00000586435 RPL30P62888 115 aaKnown RBP8.91□□□□□ -0.98
LIG3-209ENST00000586435 EIF4EBP1Q13541 118 aaPredicted RBP8.91□□□□□ -0.98
LIG3-209ENST00000586435 GUCA2BQ16661 112 aa8.91□□□□□ -0.98
LIG3-209ENST00000586435 ZNF367Q7RTV3 350 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms