RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 RPS16P62249 146 aaKnown RBP8.86□□□□□ -0.99
LIG3-207ENST00000586119 MRPS15P82914 257 aaKnown RBP8.86□□□□□ -0.99
LIG3-207ENST00000586119 KLF5Q13887 457 aaPredicted RBP8.86□□□□□ -0.99
LIG3-207ENST00000586119 CDNFQ49AH0 187 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 MOB1BQ7L9L4 216 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 CMSS1Q9BQ75 279 aaKnown RBP8.86□□□□□ -0.99
LIG3-207ENST00000586119 ELOVL1Q9BW60 279 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 KCNK7Q9Y2U2 307 aa8.86□□□□□ -0.99
LIG3-207ENST00000586119 TRAV18A0A075B6X5 111 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 IGKV1-6A0A0C4DH72 117 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 FAM25AB3EWG3 89 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 FAM25CB3EWG5 89 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 FAM25GB3EWG6 89 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 SLC25A17O43808 307 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 HPGDSO60760 199 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 EIF4EP06730 217 aaKnown RBP8.85□□□□□ -0.99
LIG3-207ENST00000586119 APELAP0DMC3 54 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 GNB3P16520 340 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 DTYMKP23919 212 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 MC5RP33032 325 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 TALDO1P37837 337 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 SYNJ2BPP57105 145 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 TMEM69Q5SWH9 247 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 HACD4Q5VWC8 232 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 PYHIN1Q6K0P9 492 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 SGPP2Q8IWX5 399 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 THAP7Q9BT49 309 aaPredicted RBP8.85□□□□□ -0.99
LIG3-207ENST00000586119 DCUN1D5Q9BTE7 237 aa8.85□□□□□ -0.99
LIG3-207ENST00000586119 RGS5O15539 181 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 IGLV2-23P01705 113 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 CRYGBP07316 175 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 CSN3P07498 182 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 ELK1P19419 428 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 GNG2P59768 71 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 DYRK1AQ13627 763 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 ARFRP1Q13795 201 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 MRGPRG-AS1Q2M3A8 158 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 Q6ZS49 121 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 POC5Q8NA72 575 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 OR9G4Q8NGQ1 327 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 RNF5Q99942 180 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 FAM110AQ9BQ89 295 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 C6orf62Q9GZU0 229 aaPredicted RBP8.84□□□□□ -0.99
LIG3-207ENST00000586119 MIXL1Q9H2W2 232 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 AUNIPQ9H7T9 357 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 RANGRFQ9HD47 186 aaPredicted RBP8.84□□□□□ -0.99
LIG3-207ENST00000586119 Q9N2K0 584 aa8.84□□□□□ -0.99
LIG3-207ENST00000586119 C13orf42A0A1B0GVH6 325 aa8.83□□□□□ -1
LIG3-207ENST00000586119 SRRM4A7MD48 611 aaKnown RBP8.83□□□□□ -1
LIG3-207ENST00000586119 CTDSP2O14595 271 aa8.83□□□□□ -1
LIG3-207ENST00000586119 ITGB1BP1O14713 200 aa8.83□□□□□ -1
LIG3-207ENST00000586119 RBBP9O75884 186 aa8.83□□□□□ -1
LIG3-207ENST00000586119 DIRAS3O95661 229 aa8.83□□□□□ -1
LIG3-207ENST00000586119 EDN2P20800 178 aa8.83□□□□□ -1
LIG3-207ENST00000586119 S100A5P33763 92 aa8.83□□□□□ -1
LIG3-207ENST00000586119 CBX5P45973 191 aa8.83□□□□□ -1
LIG3-207ENST00000586119 TAS2R20P59543 309 aa8.83□□□□□ -1
LIG3-207ENST00000586119 HLA-DRB3P79483 266 aa8.83□□□□□ -1
LIG3-207ENST00000586119 PPP1R14BQ96C90 147 aa8.83□□□□□ -1
LIG3-207ENST00000586119 C5orf30Q96GV9 206 aa8.83□□□□□ -1
LIG3-207ENST00000586119 SPATA25Q9BR10 227 aa8.83□□□□□ -1
LIG3-207ENST00000586119 SCPEP1Q9HB40 452 aa8.83□□□□□ -1
LIG3-207ENST00000586119 EXTL2Q9UBQ6 330 aa8.83□□□□□ -1
LIG3-207ENST00000586119 SELENOKQ9Y6D0 94 aa8.83□□□□□ -1
LIG3-207ENST00000586119 ALMS1Q8TCU4 4167 aa8.82□□□□□ -1
LIG3-207ENST00000586119 TMEM235A6NFC5 223 aa8.82□□□□□ -1
LIG3-207ENST00000586119 M0R1X1 148 aa8.82□□□□□ -1
LIG3-207ENST00000586119 SULT1C2O00338 296 aa8.82□□□□□ -1
LIG3-207ENST00000586119 CNIH1O95406 144 aa8.82□□□□□ -1
LIG3-207ENST00000586119 HLA-DQB1P01920 261 aa8.82□□□□□ -1
LIG3-207ENST00000586119 FCGR3AP08637 254 aa8.82□□□□□ -1
LIG3-207ENST00000586119 ZP3P21754 424 aa8.82□□□□□ -1
LIG3-207ENST00000586119 ZBTB25P24278 435 aa8.82□□□□□ -1
LIG3-207ENST00000586119 CD40LGP29965 261 aa8.82□□□□□ -1
LIG3-207ENST00000586119 PRSS3P35030 304 aa8.82□□□□□ -1
LIG3-207ENST00000586119 MRPS10P82664 201 aaKnown RBP8.82□□□□□ -1
LIG3-207ENST00000586119 LINC00299Q6ZSB3 139 aa8.82□□□□□ -1
LIG3-207ENST00000586119 LAX1Q8IWV1 398 aa8.82□□□□□ -1
LIG3-207ENST00000586119 DIRAS2Q96HU8 199 aa8.82□□□□□ -1
LIG3-207ENST00000586119 TSNAXQ99598 290 aaKnown RBP8.82□□□□□ -1
LIG3-207ENST00000586119 TUBA4BQ9H853 241 aa8.82□□□□□ -1
LIG3-207ENST00000586119 SLC35D1Q9NTN3 355 aa8.82□□□□□ -1
LIG3-207ENST00000586119 RDH8Q9NYR8 311 aa8.82□□□□□ -1
LIG3-207ENST00000586119 PEF1Q9UBV8 284 aaKnown RBP8.82□□□□□ -1
LIG3-207ENST00000586119 TRDCB7Z8K6 153 aa8.81□□□□□ -1
LIG3-207ENST00000586119 PRH1P02810 166 aa8.81□□□□□ -1
LIG3-207ENST00000586119 PTBP1P26599 531 aaKnown RBP eCLIP8.81□□□□□ -1
LIG3-207ENST00000586119 TNFSF8P32971 234 aa8.81□□□□□ -1
LIG3-207ENST00000586119 MECP2P51608 486 aaKnown RBP8.81□□□□□ -1
LIG3-207ENST00000586119 ZNF343Q6P1L6 599 aa8.81□□□□□ -1
LIG3-207ENST00000586119 CNIH2Q6PI25 160 aa8.81□□□□□ -1
LIG3-207ENST00000586119 LINC00322Q6ZN03 302 aaPredicted RBP8.81□□□□□ -1
LIG3-207ENST00000586119 PDPNQ86YL7 162 aa8.81□□□□□ -1
LIG3-207ENST00000586119 BVESQ8NE79 360 aa8.81□□□□□ -1
LIG3-207ENST00000586119 OR4A4PQ8NGN8 299 aa8.81□□□□□ -1
LIG3-207ENST00000586119 TINAGL1Q9GZM7 467 aaPredicted RBP8.81□□□□□ -1
LIG3-207ENST00000586119 WFDC10AQ9H1F0 79 aa8.81□□□□□ -1
LIG3-207ENST00000586119 HIPK2Q9H2X6 1198 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms