RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 Q6ZS49 121 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 FAM223AQ8IWN6 122 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 LAX1Q8IWV1 398 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 ADAD2Q8NCV1 583 aaKnown RBP11.42□□□□□ -0.58
VAPA-209ENST00000585042 OR10R2Q8NGX6 335 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 IL17DQ8TAD2 202 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 OSR1Q8TAX0 266 aaPredicted RBP11.42□□□□□ -0.58
VAPA-209ENST00000585042 ATG5Q9H1Y0 275 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 COA4Q9NYJ1 87 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 SMIM30A4D0T7 59 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 CREBL2O60519 120 aaPredicted RBP11.41□□□□□ -0.58
VAPA-209ENST00000585042 GSTT2P0CG29 244 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 GSTT2BP0CG30 244 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 PRSS8Q16651 343 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 ZFAND6Q6FIF0 208 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 NR2C2APQ86WQ0 139 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 DDB2Q92466 427 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 YIPF6Q96EC8 236 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 PHB2Q99623 299 aa11.41□□□□□ -0.58
VAPA-209ENST00000585042 RBM7Q9Y580 266 aaKnown RBP11.41□□□□□ -0.58
VAPA-209ENST00000585042 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 DUTP33316 252 aaKnown RBP11.4□□□□□ -0.58
VAPA-209ENST00000585042 TALDO1P37837 337 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 ARFRP1Q13795 201 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 IDNKQ5T6J7 187 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 SPIN2AQ99865 258 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 SPIN2BQ9BPZ2 258 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 GINS4Q9BRT9 223 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 ETV7Q9Y603 341 aa11.4□□□□□ -0.58
VAPA-209ENST00000585042 CSMD3Q7Z407 3707 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 TNCP24821 2201 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 A0A075B6Q4 140 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 RAB27BO00194 218 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 MFNGO00587 321 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 SLC22A5O76082 557 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 HIST1H1DP16402 221 aaKnown RBP11.39□□□□□ -0.59
VAPA-209ENST00000585042 ATP5G2Q06055 141 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 TNXAQ16473 311 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 LINC00322Q6ZN03 302 aaPredicted RBP11.39□□□□□ -0.59
VAPA-209ENST00000585042 SLC25A42Q86VD7 318 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 H1FOOQ8IZA3 346 aaPredicted RBP11.39□□□□□ -0.59
VAPA-209ENST00000585042 TTC9CQ8N5M4 171 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 SRSF12Q8WXF0 261 aaKnown RBP11.39□□□□□ -0.59
VAPA-209ENST00000585042 MRPS26Q9BYN8 205 aaKnown RBP11.39□□□□□ -0.59
VAPA-209ENST00000585042 RNF167Q9H6Y7 350 aa11.39□□□□□ -0.59
VAPA-209ENST00000585042 DYNC2H1Q8NCM8 4307 aaKnown RBP11.38□□□□□ -0.59
VAPA-209ENST00000585042 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.38□□□□□ -0.59
VAPA-209ENST00000585042 MPPED1O15442 326 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 TUSC2O75896 110 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 ACTL6BO94805 426 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 CRYZL1O95825 349 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 TRBV12-3P01733 135 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 CTXN2P0C2S0 81 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 CLEC2LP0C7M8 214 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 GNB3P16520 340 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 RHOGP84095 191 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 PLA2G7Q13093 441 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 CDK10Q15131 360 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 MMD2Q8IY49 270 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 NECAP1Q8NC96 275 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 LGALS14Q8TCE9 139 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 C5orf30Q96GV9 206 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 FUNDC2Q9BWH2 189 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 AKIP1Q9NQ31 210 aa11.38□□□□□ -0.59
VAPA-209ENST00000585042 LINC00473A8K010 186 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 BMPR1BO00238 502 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
VAPA-209ENST00000585042 DTYMKP23919 212 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 LSM3P62310 102 aaKnown RBP11.37□□□□□ -0.59
VAPA-209ENST00000585042 CDNFQ49AH0 187 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 OR13F1Q8NGS4 319 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 DIABLOQ9NR28 239 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 RHBDL2Q9NX52 303 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 SLC2A8Q9NY64 477 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 TECRQ9NZ01 308 aaKnown RBP11.37□□□□□ -0.59
VAPA-209ENST00000585042 ZNF230Q9UIE0 474 aaPredicted RBP11.37□□□□□ -0.59
VAPA-209ENST00000585042 ADAM30Q9UKF2 790 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 PRELID3BQ9Y3B1 194 aa11.37□□□□□ -0.59
VAPA-209ENST00000585042 LYSTQ99698 3801 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 A0A0A6YYH2 397 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 IZUMO1RA6ND01 250 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 A6NJ64 397 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 ZNF785A8K8V0 405 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 LGALS9O00182 355 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 TPPPO94811 219 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 EXOSC2Q13868 293 aaKnown RBP11.36□□□□□ -0.59
VAPA-209ENST00000585042 ZNF645Q8N7E2 425 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 ACOT12Q8WYK0 555 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 DCSTAMPQ9H295 470 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 HIPK2Q9H2X6 1198 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 ZNF430Q9H8G1 570 aaPredicted RBP11.36□□□□□ -0.59
VAPA-209ENST00000585042 SPATA2Q9UM82 520 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 CEPT1Q9Y6K0 416 aa11.36□□□□□ -0.59
VAPA-209ENST00000585042 HLA-DQB1P01920 261 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 SMIM18P0DKX4 95 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 APELAP0DMC3 54 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
VAPA-209ENST00000585042 KIR2DS2P43631 304 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 GNG2P59768 71 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 ZNF45Q02386 682 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms