RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 YPEL2Q96QA6 119 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 SSX3Q99909 188 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 TRAV1-1A0A0B4J248 108 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 F2RL2O00254 374 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 KHDC3LQ587J8 217 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 FFAR4Q5NUL3 377 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 RBMS3Q6XE24 437 aaKnown RBP12.98□□□□□ -0.33
TVP23C-210ENST00000584811 MBD3L1Q8WWY6 194 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 YPEL4Q96NS1 127 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 NIPSNAP3BQ9BS92 247 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
TVP23C-210ENST00000584811 SMCO3A2RU48 225 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 OR4A8P0C604 315 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 SERF2P84101 59 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 PAX5Q02548 391 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 DPPA3Q6W0C5 159 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 Q8N7P7 452 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 Q8WTZ3 238 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 TMEM147Q9BVK8 224 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 TMEM140Q9NV12 185 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 TGIF2-C20orf24A0A0A6YYL0 155 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 ADIPOQQ15848 244 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 ZNF674Q2M3X9 581 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 KRTCAP3Q53RY4 240 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 GFRALQ6UXV0 394 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 OR10G4Q8NGN3 311 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 OR10G9Q8NGN4 311 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 OR10G7Q8NGN6 311 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 SCNM1Q9BWG6 230 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 BIN3Q9NQY0 253 aa12.97□□□□□ -0.33
TVP23C-210ENST00000584811 TRAV38-1A0A0B4J264 116 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 C1orf196B1AJZ1 125 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 IFNA10P01566 189 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 FAM87AP0C7U9 286 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 CR1LQ2VPA4 569 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 SPACA3Q8IXA5 215 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 ZNF383Q8NA42 475 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 PPP1R35Q8TAP8 253 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 RND1Q92730 232 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 S1PR3Q99500 378 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 ZNF251Q9BRH9 671 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 PRRG2O14669 202 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 HPRT1P00492 218 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 IGKV1-16P04430 117 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 FOLR2P14207 255 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 NDUFB7P17568 137 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 AGAP20933 346 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 CD81P60033 236 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 RAB5BP61020 215 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 RELBQ01201 579 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 C1orf174Q8IYL3 243 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 OR4A16Q8NH70 328 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 GFOD1Q9NXC2 390 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 IL19Q9UHD0 177 aa12.96□□□□□ -0.33
TVP23C-210ENST00000584811 KLF2Q9Y5W3 355 aaPredicted RBP12.96□□□□□ -0.33
TVP23C-210ENST00000584811 COL6A6A6NMZ7 2263 aa12.96□□□□□ -0.34
TVP23C-210ENST00000584811 C16orf97H3BN30 126 aa12.96□□□□□ -0.34
TVP23C-210ENST00000584811 SOX15O60248 233 aa12.96□□□□□ -0.34
TVP23C-210ENST00000584811 PAX6P26367 422 aa12.96□□□□□ -0.34
TVP23C-210ENST00000584811 EIF2S3LQ2VIR3 472 aaKnown RBP12.96□□□□□ -0.34
TVP23C-210ENST00000584811 TVP23CQ96ET8 276 aa12.96□□□□□ -0.34
TVP23C-210ENST00000584811 SMDT1Q9H4I9 107 aa12.96□□□□□ -0.34
TVP23C-210ENST00000584811 CISD1Q9NZ45 108 aaKnown RBP12.96□□□□□ -0.34
TVP23C-210ENST00000584811 CCL3L1P16619 93 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 GATA4P43694 442 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 RPS10P46783 165 aaKnown RBP12.95□□□□□ -0.34
TVP23C-210ENST00000584811 SELENOVP59797 346 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 PRB3Q04118 309 aaPredicted RBP12.95□□□□□ -0.34
TVP23C-210ENST00000584811 TRAT1Q6PIZ9 186 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 FAM222BQ8WU58 562 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 DDB2Q92466 427 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 RAB24Q969Q5 203 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 FAM122AQ96E09 287 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 HINT2Q9BX68 163 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 HIPK2Q9H2X6 1198 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 TUBA4BQ9H853 241 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 PATZ1Q9HBE1 687 aaKnown RBP12.95□□□□□ -0.34
TVP23C-210ENST00000584811 HEYLQ9NQ87 328 aaPredicted RBP12.95□□□□□ -0.34
TVP23C-210ENST00000584811 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 ELOBQ15370 118 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 RHOVQ96L33 236 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 TANC2Q9HCD6 1990 aa12.95□□□□□ -0.34
TVP23C-210ENST00000584811 PLXNB1O43157 2135 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 NQO2P16083 231 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 MDKP21741 143 aaPredicted RBP12.94□□□□□ -0.34
TVP23C-210ENST00000584811 NUBP1P53384 320 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 TMEM108Q6UXF1 575 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 HEPN1Q6WQI6 88 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
TVP23C-210ENST00000584811 SDSLQ96GA7 329 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 TRGV10A0A0A0MS01 117 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 DLX1P56177 255 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 ZNF788Q6ZQV5 615 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 ZCCHC14Q8WYQ9 949 aaKnown RBP12.94□□□□□ -0.34
TVP23C-210ENST00000584811 CCL17Q92583 94 aa12.94□□□□□ -0.34
TVP23C-210ENST00000584811 PINX1Q96BK5 328 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms