RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 C5orf67F2Z3F1 127 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 NDUFA2O43678 99 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 FCGR2BP31994 310 aaPredicted RBP11.16□□□□□ -0.62
RNF43-208ENST00000584437 WFDC3Q8IUB2 231 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 DYNLRB2Q8TF09 96 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 VCX2Q9H322 139 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 SCN3AQ9NY46 2000 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 J3QW42 95 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
RNF43-208ENST00000584437 PRSS8Q16651 343 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 C10orf128Q5T292 105 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
RNF43-208ENST00000584437 DEFB124Q8NES8 71 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 GPHA2Q96T91 129 aa11.16□□□□□ -0.62
RNF43-208ENST00000584437 FOXC1Q12948 553 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 TM4SF20Q53R12 229 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 KCNS1Q96KK3 526 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 COL18A1P39060 1754 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 WNT9BO14905 357 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 IGHV4-34P06331 123 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 UCP1P25874 307 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 TNFSF10P50591 281 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 ABHD12Q8N2K0 398 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 USP54Q70EL1 1684 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 TRAV14DV4A0A0A6YYC5 116 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 C1QTNF9BB2RNN3 333 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 FGF5P12034 268 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 RELQ04864 619 aaPredicted RBP11.15□□□□□ -0.62
RNF43-208ENST00000584437 MEF2CQ06413 473 aaPredicted RBP11.15□□□□□ -0.62
RNF43-208ENST00000584437 OR4C13Q8NGP0 309 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 CLDND2Q8NHS1 167 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 WNT5BQ9H1J7 359 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
RNF43-208ENST00000584437 GFRA1P56159 465 aa11.15□□□□□ -0.63
RNF43-208ENST00000584437 IGLV3-21P80748 117 aaPredicted RBP11.15□□□□□ -0.63
RNF43-208ENST00000584437 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.63
RNF43-208ENST00000584437 PAPPAQ13219 1627 aa11.15□□□□□ -0.63
RNF43-208ENST00000584437 IGHV1-45A0A0A0MS14 117 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
RNF43-208ENST00000584437 FAM106CPP0CH98 169 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 CCL8P80075 99 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 SPEM2Q0P670 501 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 MBNL2Q5VZF2 373 aaKnown RBP11.14□□□□□ -0.63
RNF43-208ENST00000584437 ITLN1Q8WWA0 313 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 R4GN57 208 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 DLX6P56179 175 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 ZNF441Q8N8Z8 693 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 C14orf144Q96I85 54 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 WNT10AQ9GZT5 417 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 A0A1B0GW15 77 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 ZNF826PQ6ZT77 177 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 KIR2DL4Q99706 377 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 SCN4AP35499 1836 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 A0A1B0GTI1 187 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 TMEM229AB2RXF0 380 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 EGR1P18146 543 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 CYB5R2Q6BCY4 276 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 FAM131CQ96AQ9 280 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 TMEM186Q96B77 213 aa11.14□□□□□ -0.63
RNF43-208ENST00000584437 LAMB2P55268 1798 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 C4orf51C9J302 202 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 TBR1Q16650 682 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 GPR82Q96P67 336 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 CCDC88CQ9P219 2028 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 ATP5LO75964 103 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 SHISA5Q8N114 240 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 LAMTOR2Q9Y2Q5 125 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 CLDN16Q9Y5I7 305 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 UBE2CO00762 179 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 RRHO14718 337 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 LRTM2Q8N967 370 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 TMEM54Q969K7 222 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 RTBDNQ9BSG5 229 aaPredicted RBP11.13□□□□□ -0.63
RNF43-208ENST00000584437 ALKBH7Q9BT30 221 aaPredicted RBP11.13□□□□□ -0.63
RNF43-208ENST00000584437 A0A1W2PQM1 296 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 DNM1P46Q6ZS02 220 aa11.13□□□□□ -0.63
RNF43-208ENST00000584437 C1orf185Q5T7R7 199 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 FAM169BQ8N8A8 192 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 TRBV20OR9-2A0A075B6H5 130 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 IGHV3-72A0A0B4J1Y9 119 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 PRR33A8MZF0 331 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 UBE2L6O14933 153 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 SLC25A53Q5H9E4 307 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 RTN4RQ9BZR6 473 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
RNF43-208ENST00000584437 AHRRA9YTQ3 701 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 GPR6P46095 362 aaPredicted RBP11.12□□□□□ -0.63
RNF43-208ENST00000584437 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
RNF43-208ENST00000584437 RP1P56715 2156 aa11.12□□□□□ -0.63
RNF43-208ENST00000584437 EGR4Q05215 589 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms