RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 UTS2O95399 124 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 C1QCP02747 245 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 CTSLP07711 333 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 ZNF705DP0CH99 300 aaPredicted RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 ZNF705BP0CI00 300 aaPredicted RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 PGA4P0DJD7 388 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 PGA5P0DJD9 388 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 CT45A6P0DMU7 189 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 CT45A5P0DMU8 189 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 CT45A7P0DMV0 189 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 KCNE1P15382 129 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 ZBTB25P24278 435 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 CXCR1P25024 350 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 DLX1P56177 255 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 RPS21P63220 83 aaKnown RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 SLC35B1P78383 322 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 FAM3AP98173 230 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 RGNQ15493 299 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 NSDHLQ15738 373 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 BATFQ16520 125 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 PRSS8Q16651 343 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 CT45A1Q5HYN5 189 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 LDLRAD2Q5SZI1 272 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 RPL22L1Q6P5R6 122 aaKnown RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 FAM151BQ6UXP7 276 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 TEX43Q6ZNM6 134 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 ABHD12BQ7Z5M8 362 aaPredicted RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 S100A7AQ86SG5 101 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 C17orf78Q8N4C9 275 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 KRTCAP2Q8N6L1 136 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 COX18Q8N8Q8 333 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 SUMF2Q8NBJ7 301 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 SLC26A10Q8NG04 563 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 OR4C16Q8NGL9 310 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 OR11L1Q8NGX0 322 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 CT45A3Q8NHU0 189 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 TSLPQ969D9 159 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 ANKRD9Q96BM1 317 aaPredicted RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 TVP23CQ96ET8 276 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 SCGB3A2Q96PL1 93 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 AQP10Q96PS8 301 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 GPR21Q99679 349 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 GINS3Q9BRX5 216 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 SCRT1Q9BWW7 348 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 NMES1Q9C002 83 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 OR2S2Q9NQN1 319 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 MRPL27Q9P0M9 148 aaKnown RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 MTFP1Q9UDX5 166 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 SLC23A2Q9UGH3 650 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 SHPKQ9UHJ6 478 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 NOP16Q9Y3C1 178 aaKnown RBP3.66□□□□□ -1.82
SS18-223ENST00000583595 SNX10Q9Y5X0 201 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 A0A0G2JMZ2 1700 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 LRRC37A2A6NM11 1700 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 LRRC37AA6NMS7 1700 aa3.66□□□□□ -1.82
SS18-223ENST00000583595 PCNX3Q9H6A9 2034 aa3.65□□□□□ -1.82
SS18-223ENST00000583595 IGHV2OR16-5A0A0B4J2B6 119 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 NCBP2LA6PVI3 153 aaKnown RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 FAM166BA8MTA8 275 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 FTCDNL1E5RQL4 147 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 TRAPPC2LH3BP13 241 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 CORTO00230 105 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 XKRYO14609 159 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 GEMIN2O14893 280 aaKnown RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 ZNF354AO60765 605 aaPredicted RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 GLSO94925 669 aaPredicted RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 SOX14O95416 240 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 MMP7P09237 267 aaPredicted RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 OR8U9P0C7N5 309 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 OR12D1P0DN82 309 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 CD37P11049 281 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 GDF1P27539 372 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 IMPA1P29218 277 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 ARL2P36404 184 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 LGALS7P47929 136 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 TAS2R20P59543 309 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 EGFEM1PQ0D2K5 195 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 INSL4Q14641 139 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 ZBTB6Q15916 424 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 ACOT6Q3I5F7 207 aaPredicted RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 TMEM176BQ3YBM2 270 aaPredicted RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 ACSM3Q53FZ2 586 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 GCSAMLQ5JQS6 135 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 TMEM69Q5SWH9 247 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 TPTE2P1Q5T6R2 138 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 AADACL3Q5VUY0 350 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 FAAP20Q6NZ36 180 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 PRSS54Q6PEW0 395 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 OPN5Q6U736 354 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 COMMD6Q7Z4G1 85 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 TMED4Q7Z7H5 227 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 LYG2Q86SG7 212 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 GKN2Q86XP6 184 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 TGIF2LYQ8IUE0 185 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 NKAPP1Q8N9T2 125 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 WDR31Q8NA23 367 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 OR51D1Q8NGF3 324 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 OR2A1Q8NGT9 310 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms