RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MOSP00540 346 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SNRNP70P08621 437 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 FAM106CPP0CH98 169 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RPS16P62249 146 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LRRC75BQ2VPJ9 315 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 TMEM268Q5VZI3 342 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LIN54Q6MZP7 749 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 Q6YL49 198 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 OR2T10Q8NGZ9 312 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 OSR1Q8TAX0 266 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 ANK2Q01484 3957 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 DBX1A6NMT0 343 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SHOXO15266 292 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LGALS7P47929 136 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 KRTAP24-1Q3LI83 254 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 FBLN7Q53RD9 439 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LYZL2Q7Z4W2 148 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 Q8N6K4 173 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 UXS1Q8NBZ7 420 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RBPMSQ93062 196 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 ZDHHC16Q969W1 377 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SEC22AQ96IW7 307 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 COMMD9Q9P000 198 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 CDC42EP3Q9UKI2 254 aa13.09□□□□□ -0.31
CDK5RAP3-228ENST00000583363 PIGBOS1A0A0B4J2F0 54 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 A0A1B0GVG6 124 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 HRASP01112 189 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 IGLV2-23P01705 113 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 NQO2P16083 231 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 IER3P46695 156 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 HES1Q14469 280 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 HNF4GQ14541 408 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 POU2AF1Q16633 256 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 R3HDM4Q96D70 268 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 AIFM2Q9BRQ8 373 aa13.08□□□□□ -0.32
CDK5RAP3-228ENST00000583363 DUXBA0A1W2PPF3 345 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SSNA1O43805 119 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 ATG12O94817 140 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 KRASP01116 189 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 IGKV1-5P01602 117 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 IL6RP08887 468 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 HOXB5P09067 269 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 G6PCP35575 357 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 F2RL1P55085 397 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 C2orf68Q2NKX9 166 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 CADM3Q8N126 398 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SLC35G3Q8N808 338 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 NPBQ8NG41 125 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 LSM10Q969L4 123 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 HARBI1Q96MB7 349 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 TSNAXQ99598 290 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 PLSCR3Q9NRY6 295 aa13.07□□□□□ -0.32
CDK5RAP3-228ENST00000583363 A6NDX4 124 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 H3BUX3 64 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 CRYGBP07316 175 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 P0C879 139 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 TMEM11P17152 192 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 HLA-GP17693 338 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SRD5A1P18405 259 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 VDAC1P21796 283 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 CNTFRP26992 372 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SCGB2A2Q13296 93 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 PSG5Q15238 335 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 GGNBP1Q5YKI7 109 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 VKORC1L1Q8N0U8 176 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SIGLECL1Q8N7X8 197 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 GPR146Q96CH1 333 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 RHOVQ96L33 236 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 MED28Q9H204 178 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 RAB18Q9NP72 206 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 TCF19Q9Y242 345 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 TMED3Q9Y3Q3 217 aa13.06□□□□□ -0.32
CDK5RAP3-228ENST00000583363 MARCH11A6NNE9 402 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 ADAP1O75689 374 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 UBE2KP61086 200 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 ERVK-16P61578 105 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 RRAS2P62070 204 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SSX9Q7RTT3 188 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 FAM219AQ8IW50 185 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 PUSL1Q8N0Z8 303 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 TEX45Q8NA69 505 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 DMBX1Q8NFW5 382 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR5R1Q8NH85 324 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 RRNAD1Q96FB5 475 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 MMP24Q9Y5R2 645 aa13.05□□□□□ -0.32
CDK5RAP3-228ENST00000583363 A0A0G2JRQ6 117 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR2A4O95047 310 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 NDUFA3O95167 84 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SPDEFO95238 335 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 IFNA21P01568 189 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SAA1P0DJI8 122 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SULT1A3P0DMM9 295 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SULT1A4P0DMN0 295 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 AKR1C2P52895 323 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms