RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FCGR3AP08637 254 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
TOP3A-215ENST00000583328 DTYMKP23919 212 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 TAS2R20P59543 309 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 CD81P60033 236 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 HLA-DRB3P79483 266 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 ZNF562Q6V9R5 426 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 C5orf24Q7Z6I8 188 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 YPEL2Q96QA6 119 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 NXF2Q9GZY0 626 aaKnown RBP9.34□□□□□ -0.91
TOP3A-215ENST00000583328 JPT1Q9UK76 154 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 ELF5Q9UKW6 265 aaPredicted RBP9.34□□□□□ -0.91
TOP3A-215ENST00000583328 FAM25AB3EWG3 89 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 FAM25CB3EWG5 89 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 FAM25GB3EWG6 89 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 RGS5O15539 181 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 HTD2P86397 168 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 GLDNQ6ZMI3 551 aaPredicted RBP9.33□□□□□ -0.92
TOP3A-215ENST00000583328 Q6ZS49 121 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 POC5Q8NA72 575 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 OR5T1Q8NG75 326 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 OR2AK2Q8NG84 335 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 NUDCD2Q8WVJ2 157 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 GALMQ96C23 342 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 NEURL2Q9BR09 285 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 ST6GALNAC5Q9BVH7 336 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 C6orf62Q9GZU0 229 aaPredicted RBP9.33□□□□□ -0.92
TOP3A-215ENST00000583328 MIXL1Q9H2W2 232 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 SLC2A8Q9NY64 477 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
TOP3A-215ENST00000583328 METTL1Q9UBP6 276 aaKnown RBP9.33□□□□□ -0.92
TOP3A-215ENST00000583328 HERC2O95714 4834 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 A6NHS1 94 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 TRDCB7Z8K6 153 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 H3BUA1 57 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 H7C2Y5 167 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 CTDSP2O14595 271 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 SSX5O60225 188 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 CA2P00918 260 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 CT45A6P0DMU7 189 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 CT45A5P0DMU8 189 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 CT45A7P0DMV0 189 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 MC5RP33032 325 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 FAM71F2Q6NXP2 309 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 LAX1Q8IWV1 398 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 DEFB125Q8N687 156 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 OR2K2Q8NGT1 345 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 GRPEL2Q8TAA5 225 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 PIPOXQ9P0Z9 390 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 EXTL2Q9UBQ6 330 aa9.32□□□□□ -0.92
TOP3A-215ENST00000583328 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
TOP3A-215ENST00000583328 CXorf65A6NEN9 183 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 OR5H14A6NHG9 310 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 H0YJW9 148 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 RAB29O14966 203 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 ST8SIA5O15466 376 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 FABP7O15540 132 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 RBBP9O75884 186 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 DIRAS3O95661 229 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 HLA-DQB1P01920 261 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 PTHLHP12272 177 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 CBX5P45973 191 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 PMS2P11Q13670 270 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 FXYD3Q14802 87 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 PSG5Q15238 335 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 RPEL1Q2QD12 228 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 RPL39P5Q59GN2 51 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 LY6G6FQ5SQ64 297 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 CNIH2Q6PI25 160 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 IL1F10Q8WWZ1 152 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 MAFIPQ8WZ33 124 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 RNF5Q99942 180 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 SRD5A3Q9H8P0 318 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 RABL2AQ9UBK7 228 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-215ENST00000583328 ZNF230Q9UIE0 474 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-215ENST00000583328 RABL2BQ9UNT1 228 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 MRPS7Q9Y2R9 242 aaKnown RBP9.31□□□□□ -0.92
TOP3A-215ENST00000583328 WASHC3Q9Y3C0 194 aa9.31□□□□□ -0.92
TOP3A-215ENST00000583328 CD7P09564 240 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 SCTP09683 121 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 PRSS3P35030 304 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 MECP2P51608 486 aaKnown RBP9.3□□□□□ -0.92
TOP3A-215ENST00000583328 RPS16P62249 146 aaKnown RBP9.3□□□□□ -0.92
TOP3A-215ENST00000583328 SNX29P2Q8IUI4 249 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 C15orf40Q8WUR7 153 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 DIRAS2Q96HU8 199 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 CABLES2Q9BTV7 478 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 IFI27L2Q9H2X8 130 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 SCPEP1Q9HB40 452 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 PEMTQ9UBM1 199 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 SLC23A1Q9UHI7 598 aa9.3□□□□□ -0.92
TOP3A-215ENST00000583328 IGKV1-6A0A0C4DH72 117 aa9.29□□□□□ -0.92
TOP3A-215ENST00000583328 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
TOP3A-215ENST00000583328 SULT1C2O00338 296 aa9.29□□□□□ -0.92
TOP3A-215ENST00000583328 OR2A4O95047 310 aa9.29□□□□□ -0.92
TOP3A-215ENST00000583328 TRBV12-3P01733 135 aa9.29□□□□□ -0.92
TOP3A-215ENST00000583328 GSTT2P0CG29 244 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms