RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PTPRBP23467 1997 aa1.87□□□□□ -2.11
SMARCE1-219ENST00000583294 COL4A1P02462 1669 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 A8MUN3 132 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 ZNF705FA8MVS1 300 aaPredicted RBP1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 COX7A2LO14548 114 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 PFDN6O15212 129 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 SSNA1O43805 119 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 KLRC4O43908 158 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 PGLYRP1O75594 196 aaPredicted RBP1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 CA5AP35218 305 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 IDH3GP51553 393 aaPredicted RBP1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 TAS2R20P59543 309 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 GLO1Q04760 184 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 TNFAIP8L2Q6P589 184 aaPredicted RBP1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 COA5Q86WW8 74 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 Q8N402 240 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 OR8B12Q8NGG6 310 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 CCL13Q99616 98 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 MAP1LC3AQ9H492 121 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 CXorf21Q9HAI6 301 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 DKKL1Q9UK85 242 aa1.86□□□□□ -2.11
SMARCE1-219ENST00000583294 ABCC12Q96J65 1359 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 TRGV2A0A075B6R0 118 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 CETN3O15182 167 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 TPM3P06753 285 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 SLCO1A2P46721 670 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 RELAQ04206 551 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 OR10K2Q6IF99 312 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 SBSNQ6UWP8 590 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 SLC51BQ86UW2 128 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 COMMD7Q86VX2 200 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 HAVCR2Q8TDQ0 301 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 GNPNAT1Q96EK6 184 aaPredicted RBP1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 IMMP2LQ96T52 175 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 HDHD2Q9H0R4 259 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 DOK5Q9P104 306 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 POLR1DQ9Y2S0 133 aa1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 RBM7Q9Y580 266 aaKnown RBP1.85□□□□□ -2.11
SMARCE1-219ENST00000583294 IGHV3-64A0A075B6Q5 118 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 TMEM269A0A1B0GVZ9 245 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 IGKV2-29A2NJV5 120 aaPredicted RBP1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 APOMO95445 188 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 IL3P08700 152 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 DEFA4P12838 97 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 DDTP30046 118 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 FXYD7P58549 80 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 FKBP1AP62942 108 aaKnown RBP1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 TPM4P67936 248 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 MLLT11Q13015 90 aaPredicted RBP1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 MED21Q13503 144 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 MIAQ16674 131 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 ZNF705AQ6ZN79 300 aaPredicted RBP1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 HIST2H3AQ71DI3 136 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 TMEM161BQ8NDZ6 487 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 OR1L8Q8NGR8 309 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 VCX3BQ9H321 246 aa1.84□□□□□ -2.11
SMARCE1-219ENST00000583294 KIF15Q9NS87 1388 aa1.84□□□□□ -2.12
SMARCE1-219ENST00000583294 A0A0A6YYH2 397 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 A6NJ64 397 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 AP1S1P61966 158 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 LRRC75BQ2VPJ9 315 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 TMEM155Q4W5P6 130 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 FAM78BQ5VT40 261 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 FAM151BQ6UXP7 276 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 UMODL1-AS1Q8N2C9 162 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 C10orf126Q8N4M7 172 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 TMEM156Q8N614 296 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 ASB17Q8WXJ9 295 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 TMA16Q96EY4 203 aaKnown RBP1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 MRPL32Q9BYC8 188 aaKnown RBP1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 ANAPC10Q9UM13 185 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 COQ4Q9Y3A0 265 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 ATP6V1DQ9Y5K8 247 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 MALRD1Q5VYJ5 2156 aa1.83□□□□□ -2.12
SMARCE1-219ENST00000583294 HELZ2Q9BYK8 2649 aaKnown RBP1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 H3BT86 120 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 MAGEA12P43365 314 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 EMP2P54851 167 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 MAP3K7CLP57077 242 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 TPI1P60174 286 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 RSU1Q15404 277 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 KRTAP21-3Q3LHN1 58 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 C1orf194Q5T5A4 169 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 LYZL1Q6UWQ5 148 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 Q6ZSA8 131 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 KTN1-AS1Q86SY8 53 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 TIMM9Q9Y5J7 89 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 CCDC88CQ9P219 2028 aa1.82□□□□□ -2.12
SMARCE1-219ENST00000583294 A0A0J9YW62 118 aa1.81□□□□□ -2.12
SMARCE1-219ENST00000583294 M0QZ92 97 aa1.81□□□□□ -2.12
SMARCE1-219ENST00000583294 C1QCP02747 245 aa1.81□□□□□ -2.12
SMARCE1-219ENST00000583294 RPL12P30050 165 aaKnown RBP1.81□□□□□ -2.12
SMARCE1-219ENST00000583294 RPL30P62888 115 aaKnown RBP1.81□□□□□ -2.12
SMARCE1-219ENST00000583294 JOSD2Q8TAC2 188 aa1.81□□□□□ -2.12
SMARCE1-219ENST00000583294 PXMP4Q9Y6I8 212 aa1.81□□□□□ -2.12
SMARCE1-219ENST00000583294 PTPRSQ13332 1948 aa1.8□□□□□ -2.12
SMARCE1-219ENST00000583294 H0Y980 276 aa1.8□□□□□ -2.12
SMARCE1-219ENST00000583294 CXCR6O00574 342 aa1.8□□□□□ -2.12
SMARCE1-219ENST00000583294 CREBL2O60519 120 aaPredicted RBP1.8□□□□□ -2.12
SMARCE1-219ENST00000583294 APOEP02649 317 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms