RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 ABHD12Q8N2K0 398 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 TMEM167AQ8TBQ9 72 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 DCTN5Q9BTE1 182 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 YIF1AO95070 293 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 SFTA3P0C7M3 94 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 TMEM267Q0VDI3 215 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 Q5BKY6 102 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 CXorf66Q5JRM2 361 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 FAM162BQ5T6X4 162 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 CLEC2AQ6UVW9 174 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 MOB3BQ86TA1 216 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 ZNF525Q8N782 197 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 TUBA4BQ9H853 241 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 DPM3Q9P2X0 92 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 IGHV3-43A0A0B4J1X8 118 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 IGHV3-43DP0DP04 118 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 SSTR5P35346 364 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 C2orf83Q53S99 150 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 ONECUT1Q9UBC0 465 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 NAT8Q9UHE5 227 aa8.4□□□□□ -1.06
TRAPPC8-211ENST00000582539 IGSF23A1L1A6 192 aa8.4□□□□□ -1.07
TRAPPC8-211ENST00000582539 FAM74A7A6NL05 159 aa8.4□□□□□ -1.07
TRAPPC8-211ENST00000582539 NPBWR1P48145 328 aa8.4□□□□□ -1.07
TRAPPC8-211ENST00000582539 OR2T10Q8NGZ9 312 aa8.4□□□□□ -1.07
TRAPPC8-211ENST00000582539 MALSU1Q96EH3 234 aa8.4□□□□□ -1.07
TRAPPC8-211ENST00000582539 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.07
TRAPPC8-211ENST00000582539 IL36RNQ9UBH0 155 aa8.4□□□□□ -1.07
TRAPPC8-211ENST00000582539 ELOA3CA0A087WX78 387 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 IGKV1-6A0A0C4DH72 117 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 DVL1O14640 695 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 VENTXO95231 258 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 BCL2P10415 239 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 ZNF833PQ6ZTB9 187 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 RNF144BQ7Z419 303 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 GATAD1Q8WUU5 269 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 FGF23Q9GZV9 251 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 PATZ1Q9HBE1 687 aaKnown RBP8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 PHF3Q92576 2039 aaKnown RBP8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 CNIH1O95406 144 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 IGHV2-70P01814 119 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 FAM106CPP0CH98 169 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 GATA3P23771 443 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 GNG10P50151 68 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 Q8NA96 180 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 CLRN3Q8NCR9 226 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 PERPQ96FX8 193 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 RBM14Q96PK6 669 aaKnown RBP8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 SSBP3Q9BWW4 388 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 A0A087X0M5 115 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 MDFIC2A0A1B0GVS7 189 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 A0A1B0GX30 115 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 G3V3Q6 166 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 LILRA1O75019 489 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 C8orf46Q8TAG6 207 aa8.39□□□□□ -1.07
TRAPPC8-211ENST00000582539 COX7A2P2O60397 106 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 OPN1MWP04001 364 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 OPN1MW2P0DN77 364 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 OPN1MW3P0DN78 364 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 PITPNC1Q9UKF7 332 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 NCOA6Q14686 2063 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 TRAV9-1A0A075B6T8 112 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 A0A087WWC5 75 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 DEFB108AA8MXU0 73 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 E7EQL1 145 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 M0QZK8 103 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 OR2B11Q5JQS5 317 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 FAM122CQ6P4D5 195 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 ZNF430Q9H8G1 570 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 WDR83OSQ9Y284 106 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 C17orf98A8MV24 154 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 COX6B1P14854 86 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 EGR1P18146 543 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 PAX6P26367 422 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 RPL29P47914 159 aaKnown RBP8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 CEBPDP49716 269 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 MEOX2P50222 304 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 CENPVQ7Z7K6 275 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 CNTRLQ7Z7A1 2325 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 TMEM144Q7Z5S9 345 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 PNKDQ8N490 385 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 ZNRF1Q8ND25 227 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 IFI27L2Q9H2X8 130 aa8.38□□□□□ -1.07
TRAPPC8-211ENST00000582539 ALPK2Q86TB3 2170 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 ATF4P18848 351 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 NHLH2Q02577 135 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 OR4A47Q6IF82 309 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 OR4C12Q96R67 309 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 ZNF318Q5VUA4 2279 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 SAA2-SAA4A0A096LPE2 208 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 ZNF727A8MUV8 499 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 S100A8P05109 93 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 SAA2P0DJI9 122 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 DEFA4P12838 97 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 ZNF137PP52743 207 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 RNF212Q495C1 297 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 DTX2Q86UW9 622 aa8.37□□□□□ -1.07
TRAPPC8-211ENST00000582539 LRP11Q86VZ4 500 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms