RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 A0A0B4J2A0 478 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 SRRM4A7MD48 611 aaKnown RBP9.19□□□□□ -0.94
GGA3-211ENST00000582232 SNRPGP15A8MWD9 76 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 SHOXO15266 292 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 FGF16O43320 207 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 NDUFA3O95167 84 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 IGKV1-39P01597 117 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 IGLV2-23P01705 113 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 HLA-AP01891 365 aaKnown RBP9.19□□□□□ -0.94
GGA3-211ENST00000582232 IGKV1D-39P04432 117 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 NQO2P16083 231 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 TMEM11P17152 192 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 VAMP1P23763 118 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 RPS16P62249 146 aaKnown RBP9.19□□□□□ -0.94
GGA3-211ENST00000582232 HES1Q14469 280 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 SLC9A3R2Q15599 337 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 C4orf46Q504U0 113 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 MITD1Q8WV92 249 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 HARBI1Q96MB7 349 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 C1RLQ9NZP8 487 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 SHPKQ9UHJ6 478 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 TNCP24821 2201 aa9.19□□□□□ -0.94
GGA3-211ENST00000582232 DUXBA0A1W2PPF3 345 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 DNAJC9-AS1A6NH13 148 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 NBR2O15453 112 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 ATG12O94817 140 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 S1PR2O95136 353 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 CRYGBP07316 175 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 IL6RP08887 468 aaPredicted RBP9.18□□□□□ -0.94
GGA3-211ENST00000582232 FGF2P09038 288 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 F2RL1P55085 397 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 RAB25P57735 213 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 UBE2KP61086 200 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 HNF4GQ14541 408 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 ANKRD55Q3KP44 614 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 SELENOHQ8IZQ5 122 aaKnown RBP9.18□□□□□ -0.94
GGA3-211ENST00000582232 PUSL1Q8N0Z8 303 aaKnown RBP9.18□□□□□ -0.94
GGA3-211ENST00000582232 LGI3Q8N145 548 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 FAM71E2Q8N5Q1 922 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 TEX45Q8NA69 505 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 LHFPL5Q8TAF8 219 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 ZNF431Q8TF32 576 aaPredicted RBP9.18□□□□□ -0.94
GGA3-211ENST00000582232 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
GGA3-211ENST00000582232 R3HDM4Q96D70 268 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 SEC22AQ96IW7 307 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 RHOVQ96L33 236 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 SLC25A33Q9BSK2 321 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 BEX1Q9HBH7 125 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
GGA3-211ENST00000582232 RAB18Q9NP72 206 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 ESM1Q9NQ30 184 aa9.18□□□□□ -0.94
GGA3-211ENST00000582232 C7orf66A4D0T2 115 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 DBX1A6NMT0 343 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 MARCH11A6NNE9 402 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 M0QZK8 103 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 RRHO14718 337 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 P0C879 139 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 CNTFRP26992 372 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 RPL15P61313 204 aaKnown RBP9.17□□□□□ -0.94
GGA3-211ENST00000582232 PSG5Q15238 335 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 MMDQ15546 238 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 LY6EQ16553 131 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 VMA21Q3ZAQ7 101 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 ZNF695Q8IW36 515 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 Q8N9W7 124 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 OR52B4Q8NGK2 314 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 VSTM2AQ8TAG5 236 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 LSM10Q969L4 123 aaKnown RBP9.17□□□□□ -0.94
GGA3-211ENST00000582232 RBMXL1Q96E39 390 aaKnown RBP9.17□□□□□ -0.94
GGA3-211ENST00000582232 PHB2Q99623 299 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 SEC22CQ9BRL7 303 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 CHIAQ9BZP6 476 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 BET1LQ9NYM9 111 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 MOB4Q9Y3A3 225 aa9.17□□□□□ -0.94
GGA3-211ENST00000582232 A0A0B4J293 547 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 TCF21O43680 179 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 CHST1O43916 411 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 CREBL2O60519 120 aaPredicted RBP9.16□□□□□ -0.94
GGA3-211ENST00000582232 OR2A4O95047 310 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 KRASP01116 189 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 IGKV1-5P01602 117 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 AMY1AP04745 511 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 RNASE1P07998 156 aaKnown RBP9.16□□□□□ -0.94
GGA3-211ENST00000582232 SAA1P0DJI8 122 aaPredicted RBP9.16□□□□□ -0.94
GGA3-211ENST00000582232 VDAC1P21796 283 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 ERVK-16P61578 105 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 TATDN3Q17R31 274 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 C5orf64Q2M2E5 130 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 TMEM268Q5VZI3 342 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 TMEM219Q86XT9 240 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 FAM219AQ8IW50 185 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 C5orf56Q8N8D9 126 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 COQ8AQ8NI60 647 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 TMEM167AQ8TBQ9 72 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 CASTOR1Q8WTX7 329 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 OR2A7Q96R45 310 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 KIAA1456Q9P272 454 aa9.16□□□□□ -0.94
GGA3-211ENST00000582232 SIGLEC9Q9Y336 463 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms