RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 HLA-DRB5Q30154 266 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 OR4A47Q6IF82 309 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 UBAC2Q8NBM4 344 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 SMIM8Q96KF7 97 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 CLEC7AQ9BXN2 247 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 SIRT7Q9NRC8 400 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 VPS13CQ709C8 3753 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 FAM90A9PA6NNJ1 464 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 APOA2P02652 100 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 METTL15P1P0C7V9 234 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 EIF5AP63241 154 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 TAGLNQ01995 201 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 DHRS7BQ6IAN0 325 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 STX12Q86Y82 276 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 TGIF2LXQ8IUE1 241 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 OR5AN1Q8NGI8 311 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 SLC25A32Q9H2D1 315 aa12.05□□□□□ -0.48
CDK5RAP3-218ENST00000580391 TEX46H3BTG2 121 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 H7C2Y5 167 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 FBXO24O75426 580 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 MED6O75586 246 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 SULT1A1P50225 295 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 AARDQ4LEZ3 155 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 SPANXN5Q5MJ07 72 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 HAPLN4Q86UW8 402 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 COMMD7Q86VX2 200 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 PDZD9Q8IXQ8 264 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 OR4A16Q8NH70 328 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 TNFRSF14Q92956 283 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 CITED4Q96RK1 184 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 AUP1Q9Y679 476 aa12.04□□□□□ -0.48
CDK5RAP3-218ENST00000580391 BORCS7-ASMTA0A0B4J1R7 106 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 SRRM4A7MD48 611 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 CEBPZOSA8MTT3 80 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 LEUTXA8MZ59 168 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 IL3RAP26951 378 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 TAS2R30P59541 319 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 ARL16Q0P5N6 197 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 PNKDQ8N490 385 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 OR4P4Q8NGL7 312 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 OR4C12Q96R67 309 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 ARV1Q9H2C2 271 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 hCG_1809904A0A1W2PP81 198 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 A0A1W2PPE2 198 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 A0A1W2PR64 198 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 A0A1W2PRV1 198 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 C15orf61A6NNL5 157 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 HRASP01112 189 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 IFNA17P01571 189 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 KLRD1Q13241 179 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 BEND2Q8NDZ0 799 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 NRGNQ92686 78 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 PLA2G2EQ9NZK7 142 aa12.03□□□□□ -0.48
CDK5RAP3-218ENST00000580391 FBN2P35556 2912 aa12.02□□□□□ -0.48
CDK5RAP3-218ENST00000580391 M0R1W7 72 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SHOXO15266 292 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RRASP10301 218 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 COX6B1P14854 86 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 MYOD1P15172 320 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PDLIM4P50479 330 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ARHGDIBP52566 201 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PRRX1P54821 245 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LCN2P80188 198 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OR1S2Q8NGQ3 325 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 GINS3Q9BRX5 216 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SH3BGRL3Q9H299 93 aa12.02□□□□□ -0.49
CDK5RAP3-218ENST00000580391 IGHV3-72A0A0B4J1Y9 119 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 BUB1B-PAK6H3BSN5 160 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 FGF16O43320 207 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LMO4P61968 165 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ZNF266Q14584 549 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TMEM177Q53S58 311 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TMEM14EPQ6UXP3 125 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PDPNQ86YL7 162 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 OSR1Q8TAX0 266 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ATP5SQ99766 215 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 BARX1Q9HBU1 254 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 NUP50Q9UKX7 468 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 FAM157CP0CG43 387 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SPCS3P61009 180 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RPS16P62249 146 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 LDLRAD2Q5SZI1 272 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 SP5Q6BEB4 398 aaPredicted RBP12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ZNF429Q86V71 674 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PCGF1Q9BSM1 259 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TMEM14BQ9NUH8 114 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TCF19Q9Y242 345 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 WASHC3Q9Y3C0 194 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 RFNGQ9Y644 331 aa12.01□□□□□ -0.49
CDK5RAP3-218ENST00000580391 ENSAO43768 121 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 IL6RP08887 468 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 S100A1P23297 94 aa12□□□□□ -0.49
CDK5RAP3-218ENST00000580391 PAX2Q02962 417 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms