RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MYCNOSP40205 109 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 CATR1Q13166 79 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 PRSS8Q16651 343 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 ACTBL2Q562R1 376 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 VAX1Q5SQQ9 334 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 KPRPQ5T749 579 aaPredicted RBP11.27□□□□□ -0.61
MKS1-207ENST00000578789 PYHIN1Q6K0P9 492 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 UNQ5815/PRO19632Q6UWF5 114 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 OR5M8Q8NGP6 311 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 GRPEL2Q8TAA5 225 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 ABHD1Q96SE0 405 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 GPHA2Q96T91 129 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 P2RX4Q99571 388 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 RBM38Q9H0Z9 239 aaKnown RBP11.27□□□□□ -0.61
MKS1-207ENST00000578789 KLK15Q9H2R5 256 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 A3GALT2U3KPV4 340 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 G3V4G9 280 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 TNFSF12O43508 249 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 CREBL2O60519 120 aaPredicted RBP11.26□□□□□ -0.61
MKS1-207ENST00000578789 CD33P20138 364 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 RAB9AP51151 201 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 TMEM65Q6PI78 240 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 IDO2Q6ZQW0 420 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 MRPL41Q8IXM3 137 aaKnown RBP11.26□□□□□ -0.61
MKS1-207ENST00000578789 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 LFNGQ8NES3 379 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 OR6F1Q8NGZ6 308 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 OR52I2Q8NH67 350 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 DCUN1D5Q9BTE7 237 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 NXF2Q9GZY0 626 aaKnown RBP11.26□□□□□ -0.61
MKS1-207ENST00000578789 RABL2AQ9UBK7 228 aaPredicted RBP11.26□□□□□ -0.61
MKS1-207ENST00000578789 KLK11Q9UBX7 282 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 MTFP1Q9UDX5 166 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
MKS1-207ENST00000578789 TNCP24821 2201 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 H3BUA1 57 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 CNIH1O95406 144 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 GNB1P62873 340 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 MRPS10P82664 201 aaKnown RBP11.25□□□□□ -0.61
MKS1-207ENST00000578789 RUNX1Q01196 453 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 RNASE12Q5GAN4 147 aaKnown RBP11.25□□□□□ -0.61
MKS1-207ENST00000578789 C1QL4Q86Z23 238 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 MMD2Q8IY49 270 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 PUSL1Q8N0Z8 303 aaKnown RBP11.25□□□□□ -0.61
MKS1-207ENST00000578789 VSTM2AQ8TAG5 236 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 TMEM68Q96MH6 324 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 ZNF430Q9H8G1 570 aaPredicted RBP11.25□□□□□ -0.61
MKS1-207ENST00000578789 VSIG4Q9Y279 399 aa11.25□□□□□ -0.61
MKS1-207ENST00000578789 GABARAPH6UMI1 98 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 RAMP3O60896 148 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 KBTBD11O94819 623 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 BRI3O95415 125 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 TBPP20226 339 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 TSPAN5P62079 268 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 DEFA6Q01524 100 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
MKS1-207ENST00000578789 FHL3Q13643 280 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 TNXAQ16473 311 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 SPAG16Q8N0X2 631 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
MKS1-207ENST00000578789 RCC1LQ96I51 464 aaKnown RBP11.24□□□□□ -0.61
MKS1-207ENST00000578789 C6orf62Q9GZU0 229 aaPredicted RBP11.24□□□□□ -0.61
MKS1-207ENST00000578789 SLA2Q9H6Q3 261 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
MKS1-207ENST00000578789 I3L521 148 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 M0QYG6 137 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 ZNF701M0R085 212 aaPredicted RBP11.23□□□□□ -0.61
MKS1-207ENST00000578789 CCL24O00175 119 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 GPR31O00270 319 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 CTDSPLO15194 276 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
MKS1-207ENST00000578789 OR2A4O95047 310 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 DUS4LO95620 317 aaKnown RBP11.23□□□□□ -0.61
MKS1-207ENST00000578789 HPRT1P00492 218 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 HRASP01112 189 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 CD74P04233 296 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 IGLL1P15814 213 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 UCP3P55916 312 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 TAS2R31P59538 309 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 DGCR2P98153 550 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 POU2AF1Q16633 256 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 DEFB136Q30KP8 78 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 OXLD1Q5BKU9 147 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 RNASE10Q5GAN6 216 aaKnown RBP11.23□□□□□ -0.61
MKS1-207ENST00000578789 AADACL3Q5VUY0 350 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 LPCAT3Q6P1A2 487 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 VKORC1L1Q8N0U8 176 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 ARRDC1Q8N5I2 433 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 POC5Q8NA72 575 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 OR51H1Q8NH63 302 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 SMIM4Q8WVI0 70 aa11.23□□□□□ -0.61
MKS1-207ENST00000578789 FCAMRQ8WWV6 532 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms