RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 GPN1Q9HCN4 374 aaPredicted RBP6.45□□□□□ -1.38
COPS3-215ENST00000578317 LIN7CQ9NUP9 197 aaKnown RBP6.45□□□□□ -1.38
COPS3-215ENST00000578317 TMEM56-RWDD3S4R434 201 aa6.45□□□□□ -1.38
COPS3-215ENST00000578317 TRAV40A0A0B4J280 105 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 IGHV1-3A0A0C4DH29 117 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 A0A1W2PPI3 338 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 FAM90A9PA6NNJ1 464 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 VGLL3A8MV65 326 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 H0YJW9 148 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 TNFSF12O43508 249 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 CD1BP29016 333 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 ARHGDIBP52566 201 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 RAB25P57735 213 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 LINC00205P59089 165 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 SRPXP78539 464 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 RAB32Q13637 225 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 EBI3Q14213 229 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 DIAPH2-AS1Q14236 149 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 TMEM187Q14656 261 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 SSX2Q16385 188 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 DHRS7BQ6IAN0 325 aaPredicted RBP6.44□□□□□ -1.38
COPS3-215ENST00000578317 LHFPL4Q7Z7J7 247 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 PDZD9Q8IXQ8 264 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 SPAG16Q8N0X2 631 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 DRAXINQ8NBI3 349 aaPredicted RBP6.44□□□□□ -1.38
COPS3-215ENST00000578317 IL22RA2Q969J5 263 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 TP53RKQ96S44 253 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 AIFM2Q9BRQ8 373 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 MRPL20Q9BYC9 149 aaKnown RBP6.44□□□□□ -1.38
COPS3-215ENST00000578317 TMEM222Q9H0R3 208 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 PLEKHA2Q9HB19 425 aa6.44□□□□□ -1.38
COPS3-215ENST00000578317 A0A0B4J293 547 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 CREBL2O60519 120 aaPredicted RBP6.43□□□□□ -1.38
COPS3-215ENST00000578317 HPRT1P00492 218 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 HLA-AP01891 365 aaKnown RBP6.43□□□□□ -1.38
COPS3-215ENST00000578317 SERPINE2P07093 398 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 OR5AC1P0C628 307 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 HLA-GP17693 338 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 LGALS7P47929 136 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 REG1BP48304 166 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 RAB13P51153 203 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 SP6Q3SY56 376 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 FAM120AOSQ5T036 256 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 PDPNQ86YL7 162 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 OR51H1Q8NH63 302 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 TCTEX1D2Q8WW35 142 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 CFHR4Q92496 578 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 GPHA2Q96T91 129 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 BEX2Q9BXY8 128 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 BEX1Q9HBH7 125 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 HILPDAQ9Y5L2 63 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 DUXBA0A1W2PPF3 345 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 A0A1W2PRD5 423 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 A0A1W2PRF3 423 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 A0A1W2PRM7 423 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 DBX1A6NMT0 343 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 TIMM23O14925 209 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 RAMP3O60896 148 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 FCGR3BO75015 233 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 ATG12O94817 140 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 LY6G6DO95868 133 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 APOA2P02652 100 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 FBP1P09467 338 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 BRS3P32247 399 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 POU2AF1Q16633 256 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 RTL8BQ17RB0 113 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 BRD3OSQ6XYD6 125 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 LGI3Q8N145 548 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 DYNAPQ8N1N2 210 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 C12orf45Q8N5I9 185 aaPredicted RBP6.43□□□□□ -1.38
COPS3-215ENST00000578317 OR4C13Q8NGP0 309 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 OR4S2Q8NH73 311 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 COQ8AQ8NI60 647 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 OSR1Q8TAX0 266 aaPredicted RBP6.43□□□□□ -1.38
COPS3-215ENST00000578317 C17orf50Q8WW18 174 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 RBPMSQ93062 196 aaKnown RBP6.43□□□□□ -1.38
COPS3-215ENST00000578317 FLYWCH2Q96CP2 140 aaKnown RBP6.43□□□□□ -1.38
COPS3-215ENST00000578317 PHB2Q99623 299 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 SPATA25Q9BR10 227 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 MS4A7Q9GZW8 240 aaPredicted RBP6.43□□□□□ -1.38
COPS3-215ENST00000578317 OR51J1Q9H342 316 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 YAE1D1Q9NRH1 226 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 SLC35D1Q9NTN3 355 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 WASHC3Q9Y3C0 194 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 FAM96BQ9Y3D0 163 aa6.43□□□□□ -1.38
COPS3-215ENST00000578317 NAV3Q8IVL0 2385 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 A0A0U1RQK1 487 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 IGKV1-16P04430 117 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 FAM106CPP0CH98 169 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 HNF1AP20823 631 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 VDAC1P21796 283 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 LPAR6P43657 344 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 ANKRD55Q3KP44 614 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 RUSC1-AS1Q66K80 236 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 MOB3BQ86TA1 216 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 SELENOHQ8IZQ5 122 aaKnown RBP6.42□□□□□ -1.38
COPS3-215ENST00000578317 OR52B4Q8NGK2 314 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 PIFOQ8TCI5 191 aa6.42□□□□□ -1.38
COPS3-215ENST00000578317 LSM10Q969L4 123 aaKnown RBP6.42□□□□□ -1.38
COPS3-215ENST00000578317 SEC22CQ9BRL7 303 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms